RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 RANBP17Q9H2T7 1088 aaKnown RBP14.21□□□□□ -0.13
COPB1-206ENST00000529210 PRR12Q9ULL5 1215 aa14.21□□□□□ -0.13
COPB1-206ENST00000529210 NEDD4P46934 1319 aa14.2□□□□□ -0.14
COPB1-206ENST00000529210 PDHBP11177 359 aa14.2□□□□□ -0.14
COPB1-206ENST00000529210 IRX6P78412 446 aaPredicted RBP14.2□□□□□ -0.14
COPB1-206ENST00000529210 RRP12Q5JTH9 1297 aaKnown RBP14.2□□□□□ -0.14
COPB1-206ENST00000529210 DDX11Q96FC9 970 aa14.2□□□□□ -0.14
COPB1-206ENST00000529210 FGD4Q96M96 766 aa14.2□□□□□ -0.14
COPB1-206ENST00000529210 IL25Q9H293 177 aa14.2□□□□□ -0.14
COPB1-206ENST00000529210 ACAD9Q9H845 621 aa14.2□□□□□ -0.14
COPB1-206ENST00000529210 TOMM22Q9NS69 142 aa14.2□□□□□ -0.14
COPB1-206ENST00000529210 ICAM1P05362 532 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 AKR1A1P14550 325 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 BMP8BP34820 402 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 IMMTQ16891 758 aaKnown RBP14.19□□□□□ -0.14
COPB1-206ENST00000529210 PRAMEF19Q5SWL8 479 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 CHRDL2Q6WN34 429 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 IQCA1Q86XH1 822 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 ANKRD35Q8N283 1001 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 FAM133AQ8N9E0 248 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 RUFY2Q8WXA3 655 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 PNMA2Q9UL42 364 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 CNPY2Q9Y2B0 182 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 TRIOBPQ9H2D6 2365 aa14.19□□□□□ -0.14
COPB1-206ENST00000529210 SNAI1O95863 264 aaPredicted RBP14.18□□□□□ -0.14
COPB1-206ENST00000529210 CHMLP26374 656 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 ZNF543Q08ER8 600 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 IKQ13123 557 aaPredicted RBP14.18□□□□□ -0.14
COPB1-206ENST00000529210 SNX17Q15036 470 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 LRRC41Q15345 812 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 LRRC26Q2I0M4 334 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 GPATCH4Q5T3I0 446 aaKnown RBP14.18□□□□□ -0.14
COPB1-206ENST00000529210 C1orf53Q5VUE5 145 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 RASGRP2Q7LDG7 609 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 AGBL1Q96MI9 1066 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 GDF15Q99988 308 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 CNNM2Q9H8M5 875 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 A1CFQ9NQ94 594 aaKnown RBP14.18□□□□□ -0.14
COPB1-206ENST00000529210 RNF146Q9NTX7 359 aa14.18□□□□□ -0.14
COPB1-206ENST00000529210 RBM27Q9P2N5 1060 aaKnown RBP14.18□□□□□ -0.14
COPB1-206ENST00000529210 LOC102724159A0A0B4J2E5 919 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 KDM4AO75164 1064 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 RARBP10826 455 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 TAL1P17542 331 aaPredicted RBP14.17□□□□□ -0.14
COPB1-206ENST00000529210 FXR1P51114 621 aaKnown RBP eCLIP14.17□□□□□ -0.144e-7■■■■■ 30.9
COPB1-206ENST00000529210 PWP2Q15269 919 aaKnown RBP14.17□□□□□ -0.14
COPB1-206ENST00000529210 CCDC96Q2M329 555 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 SYDE2Q5VT97 1194 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 TTBK2Q6IQ55 1244 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 C7orf61Q8IZ16 206 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 TRERF1Q96PN7 1200 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 KRT23Q9C075 422 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 MAF1Q9H063 256 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 ABHD16BQ9H3Z7 469 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 LCTP09848 1927 aa14.17□□□□□ -0.14
COPB1-206ENST00000529210 WDR19Q8NEZ3 1342 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 MCM3APO60318 1980 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 KBTBD13C9JR72 458 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 POTEB2H3BUK9 544 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 SGSM2O43147 1006 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 ADAMTS4O75173 837 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 NKX3-2P78367 333 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 GJC2Q5T442 439 aaPredicted RBP14.16□□□□□ -0.14
COPB1-206ENST00000529210 MORC4Q8TE76 937 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 ZSCAN10Q96SZ4 725 aaPredicted RBP14.16□□□□□ -0.14
COPB1-206ENST00000529210 SENP6Q9GZR1 1112 aaPredicted RBP14.16□□□□□ -0.14
COPB1-206ENST00000529210 KATNBL1Q9H079 304 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 XPNPEP3Q9NQH7 507 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.16□□□□□ -0.14
COPB1-206ENST00000529210 CYP39A1Q9NYL5 469 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 ZSWIM5Q9P217 1185 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 FAM184BQ9ULE4 1060 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 PHF24Q9UPV7 400 aa14.16□□□□□ -0.14
COPB1-206ENST00000529210 LRRC37A2A6NM11 1700 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 ASB14A6NK59 587 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 B4E1Z4 1266 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 DUSP11O75319 330 aaKnown RBP14.15□□□□□ -0.14
COPB1-206ENST00000529210 ALAS1P13196 640 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 CST5P28325 142 aaPredicted RBP14.15□□□□□ -0.14
COPB1-206ENST00000529210 CNTN2Q02246 1040 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 ACVR2BQ13705 512 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 ARMCX2Q7L311 632 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 RNF180Q86T96 592 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 ENAHQ8N8S7 591 aaPredicted RBP14.15□□□□□ -0.14
COPB1-206ENST00000529210 PNMA1Q8ND90 353 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 KLHDC9Q8NEP7 349 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 TSEN34Q9BSV6 310 aaKnown RBP14.15□□□□□ -0.14
COPB1-206ENST00000529210 CCPG1Q9ULG6 757 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 ISY1Q9ULR0 285 aaKnown RBP14.15□□□□□ -0.14
COPB1-206ENST00000529210 LAMA3Q16787 3333 aa14.15□□□□□ -0.14
COPB1-206ENST00000529210 SZT2Q5T011 3432 aa14.14□□□□□ -0.15
COPB1-206ENST00000529210 SLC16A2P36021 539 aa14.14□□□□□ -0.15
COPB1-206ENST00000529210 ASPRV1Q53RT3 343 aa14.14□□□□□ -0.15
COPB1-206ENST00000529210 MUM1L1Q5H9M0 696 aa14.14□□□□□ -0.15
COPB1-206ENST00000529210 ANO1Q5XXA6 986 aa14.14□□□□□ -0.15
COPB1-206ENST00000529210 CCSAPQ6IQ19 270 aaPredicted RBP14.14□□□□□ -0.15
COPB1-206ENST00000529210 CCDC174Q6PII3 467 aa14.14□□□□□ -0.15
COPB1-206ENST00000529210 SLC39A5Q6ZMH5 540 aa14.14□□□□□ -0.15
COPB1-206ENST00000529210 CCDC144CPQ8IYA2 1237 aa14.14□□□□□ -0.15
COPB1-206ENST00000529210 ZKSCAN3Q9BRR0 538 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms