RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 COPB2P35606 906 aa22.85■■□□□ 1.25
SSRP1-204ENST00000529002 CCL23P55773 120 aa22.85■■□□□ 1.25
SSRP1-204ENST00000529002 STK11IPQ8N1F8 1099 aa22.85■■□□□ 1.25
SSRP1-204ENST00000529002 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.84■■□□□ 1.25
SSRP1-204ENST00000529002 RFXAPO00287 272 aa22.84■■□□□ 1.25
SSRP1-204ENST00000529002 TLR3O15455 904 aaKnown RBP22.84■■□□□ 1.25
SSRP1-204ENST00000529002 CXCL17Q6UXB2 119 aa22.84■■□□□ 1.25
SSRP1-204ENST00000529002 ARMCX2Q7L311 632 aa22.84■■□□□ 1.25
SSRP1-204ENST00000529002 RHPN1Q8TCX5 695 aa22.84■■□□□ 1.25
SSRP1-204ENST00000529002 RAVER2Q9HCJ3 691 aaKnown RBP22.84■■□□□ 1.25
SSRP1-204ENST00000529002 ATP8A2Q9NTI2 1148 aa22.84■■□□□ 1.25
SSRP1-204ENST00000529002 DDX49Q9Y6V7 483 aaKnown RBP22.84■■□□□ 1.25
SSRP1-204ENST00000529002 ASTN1O14525 1302 aa22.83■■□□□ 1.25
SSRP1-204ENST00000529002 KATNBL1Q9H079 304 aa22.83■■□□□ 1.25
SSRP1-204ENST00000529002 ABHD16BQ9H3Z7 469 aa22.83■■□□□ 1.25
SSRP1-204ENST00000529002 HIPK3Q9H422 1215 aa22.83■■□□□ 1.25
SSRP1-204ENST00000529002 EPHX3Q9H6B9 360 aa22.83■■□□□ 1.25
SSRP1-204ENST00000529002 SPC25Q9HBM1 224 aa22.83■■□□□ 1.25
SSRP1-204ENST00000529002 HOXD11P31277 338 aaPredicted RBP22.82■■□□□ 1.24
SSRP1-204ENST00000529002 ADD2P35612 726 aa22.82■■□□□ 1.24
SSRP1-204ENST00000529002 ERC1Q8IUD2 1116 aa22.82■■□□□ 1.24
SSRP1-204ENST00000529002 VWCEQ96DN2 955 aa22.82■■□□□ 1.24
SSRP1-204ENST00000529002 GRIN2DO15399 1336 aa22.82■■□□□ 1.24
SSRP1-204ENST00000529002 NDUFB10O96000 172 aa22.81■■□□□ 1.24
SSRP1-204ENST00000529002 CNTN2Q02246 1040 aa22.81■■□□□ 1.24
SSRP1-204ENST00000529002 SKIV2LQ15477 1246 aaKnown RBP22.81■■□□□ 1.24
SSRP1-204ENST00000529002 PPP2R2DQ66LE6 453 aa22.81■■□□□ 1.24
SSRP1-204ENST00000529002 CTR9Q6PD62 1173 aa22.81■■□□□ 1.24
SSRP1-204ENST00000529002 ZNF467Q7Z7K2 595 aaPredicted RBP22.81■■□□□ 1.24
SSRP1-204ENST00000529002 FTSJ3Q8IY81 847 aaKnown RBP22.81■■□□□ 1.24
SSRP1-204ENST00000529002 CCDC144CPQ8IYA2 1237 aa22.81■■□□□ 1.24
SSRP1-204ENST00000529002 TRPV6Q9H1D0 765 aa22.81■■□□□ 1.24
SSRP1-204ENST00000529002 WNT8AQ9H1J5 351 aa22.81■■□□□ 1.24
SSRP1-204ENST00000529002 KRT40Q6A162 431 aa22.8■■□□□ 1.24
SSRP1-204ENST00000529002 ANKRD35Q8N283 1001 aa22.8■■□□□ 1.24
SSRP1-204ENST00000529002 KIFC2Q96AC6 838 aa22.8■■□□□ 1.24
SSRP1-204ENST00000529002 SCLYQ96I15 445 aa22.8■■□□□ 1.24
SSRP1-204ENST00000529002 BOLA2Q9H3K6 86 aa22.8■■□□□ 1.24
SSRP1-204ENST00000529002 CERS4Q9HA82 394 aa22.8■■□□□ 1.24
SSRP1-204ENST00000529002 SLC4A4Q9Y6R1 1079 aa22.8■■□□□ 1.24
SSRP1-204ENST00000529002 XIRP2A4UGR9 3374 aa22.8■■□□□ 1.24
SSRP1-204ENST00000529002 LRRC37A2A6NM11 1700 aa22.79■■□□□ 1.24
SSRP1-204ENST00000529002 F5H6K3 240 aa22.79■■□□□ 1.24
SSRP1-204ENST00000529002 PSMC6P62333 389 aa22.79■■□□□ 1.24
SSRP1-204ENST00000529002 KLRC3Q07444 240 aa22.79■■□□□ 1.24
SSRP1-204ENST00000529002 NOL8Q76FK4 1167 aaKnown RBP22.79■■□□□ 1.24
SSRP1-204ENST00000529002 SLC43A3Q8NBI5 491 aa22.79■■□□□ 1.24
SSRP1-204ENST00000529002 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.79■■□□□ 1.24
SSRP1-204ENST00000529002 LRFN3Q9BTN0 628 aa22.79■■□□□ 1.24
SSRP1-204ENST00000529002 NOC4LQ9BVI4 516 aaKnown RBP22.79■■□□□ 1.24
SSRP1-204ENST00000529002 C1QTNF1Q9BXJ1 281 aa22.79■■□□□ 1.24
SSRP1-204ENST00000529002 TSPYL2Q9H2G4 693 aaPredicted RBP22.79■■□□□ 1.24
SSRP1-204ENST00000529002 MTIF3Q9H2K0 278 aaKnown RBP22.79■■□□□ 1.24
SSRP1-204ENST00000529002 HOMER2Q9NSB8 354 aa22.79■■□□□ 1.24
SSRP1-204ENST00000529002 PAG1Q9NWQ8 432 aa22.79■■□□□ 1.24
SSRP1-204ENST00000529002 ZBBXA8MT70 800 aa22.78■■□□□ 1.24
SSRP1-204ENST00000529002 ITGA7Q13683 1181 aa22.78■■□□□ 1.24
SSRP1-204ENST00000529002 TMEM63BQ5T3F8 832 aa22.78■■□□□ 1.24
SSRP1-204ENST00000529002 AMOTL1Q8IY63 956 aa22.78■■□□□ 1.24
SSRP1-204ENST00000529002 PRPF38AQ8NAV1 312 aaKnown RBP22.78■■□□□ 1.24
SSRP1-204ENST00000529002 SLC4A7Q9Y6M7 1214 aa22.78■■□□□ 1.24
SSRP1-204ENST00000529002 ZBED9Q6R2W3 1325 aa22.78■■□□□ 1.24
SSRP1-204ENST00000529002 EPOPA6NHQ4 379 aa22.77■■□□□ 1.24
SSRP1-204ENST00000529002 ATP2A1O14983 1001 aa22.77■■□□□ 1.24
SSRP1-204ENST00000529002 B4GALT4O60513 344 aa22.77■■□□□ 1.24
SSRP1-204ENST00000529002 ZBED4O75132 1171 aa22.77■■□□□ 1.24
SSRP1-204ENST00000529002 RASA1P20936 1047 aa22.77■■□□□ 1.24
SSRP1-204ENST00000529002 TNFAIP2Q03169 654 aa22.77■■□□□ 1.24
SSRP1-204ENST00000529002 CTDP1Q9Y5B0 961 aaPredicted RBP22.77■■□□□ 1.24
SSRP1-204ENST00000529002 BRWD1Q9NSI6 2320 aa22.77■■□□□ 1.24
SSRP1-204ENST00000529002 LCTP09848 1927 aa22.76■■□□□ 1.23
SSRP1-204ENST00000529002 IFIT2P09913 472 aaKnown RBP22.76■■□□□ 1.23
SSRP1-204ENST00000529002 TTLL4Q14679 1199 aa22.76■■□□□ 1.23
SSRP1-204ENST00000529002 PUS7LQ9H0K6 701 aaKnown RBP22.76■■□□□ 1.23
SSRP1-204ENST00000529002 SLC38A10Q9HBR0 1119 aa22.76■■□□□ 1.23
SSRP1-204ENST00000529002 GNEQ9Y223 722 aaKnown RBP22.76■■□□□ 1.23
SSRP1-204ENST00000529002 PCDHA11Q9Y5I1 949 aa22.76■■□□□ 1.23
SSRP1-204ENST00000529002 TET1Q8NFU7 2136 aa22.76■■□□□ 1.23
SSRP1-204ENST00000529002 NKX3-2P78367 333 aa22.75■■□□□ 1.23
SSRP1-204ENST00000529002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.75■■□□□ 1.23
SSRP1-204ENST00000529002 TLK2Q86UE8 772 aa22.75■■□□□ 1.23
SSRP1-204ENST00000529002 CLASRPQ8N2M8 674 aaKnown RBP22.75■■□□□ 1.23
SSRP1-204ENST00000529002 KHSRPQ92945 711 aaKnown RBP eCLIP22.75■■□□□ 1.23
SSRP1-204ENST00000529002 CHMP4CQ96CF2 233 aa22.75■■□□□ 1.23
SSRP1-204ENST00000529002 PDGFCQ9NRA1 345 aa22.75■■□□□ 1.23
SSRP1-204ENST00000529002 NYAP2Q9P242 653 aa22.75■■□□□ 1.23
SSRP1-204ENST00000529002 CLIP2Q9UDT6 1046 aa22.75■■□□□ 1.23
SSRP1-204ENST00000529002 MTCH2Q9Y6C9 303 aa22.75■■□□□ 1.23
SSRP1-204ENST00000529002 SOWAHBA6NEL2 793 aa22.74■■□□□ 1.23
SSRP1-204ENST00000529002 ERC2O15083 957 aa22.74■■□□□ 1.23
SSRP1-204ENST00000529002 DYNC1LI2O43237 492 aaPredicted RBP22.74■■□□□ 1.23
SSRP1-204ENST00000529002 ARHGEF15O94989 841 aa22.74■■□□□ 1.23
SSRP1-204ENST00000529002 SMPD1P17405 629 aa22.74■■□□□ 1.23
SSRP1-204ENST00000529002 FSCN1Q16658 493 aaKnown RBP22.74■■□□□ 1.23
SSRP1-204ENST00000529002 AGBL1Q96MI9 1066 aa22.74■■□□□ 1.23
SSRP1-204ENST00000529002 CA3P07451 260 aa22.73■■□□□ 1.23
SSRP1-204ENST00000529002 ATP2A2P16615 1042 aaKnown RBP22.73■■□□□ 1.23
SSRP1-204ENST00000529002 EEPD1Q7L9B9 569 aa22.73■■□□□ 1.23
SSRP1-204ENST00000529002 DEFB128Q7Z7B8 93 aa22.73■■□□□ 1.23
SSRP1-204ENST00000529002 FAM133AQ8N9E0 248 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms