RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	BMP3	P12645	472 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	FOSL2	P15408	326 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CDK7	P50613	346 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	PCSK9	Q8NBP7	692 aa	Known RBP	13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CHST13	Q8NET6	341 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ABHD16B	Q9H3Z7	469 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	HOMER2	Q9NSB8	354 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840		A0A0C4DFX4	3053 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	PLXNA1	Q9UIW2	1896 aa		13.55	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TMEM232	C9JQI7	657 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ADCY6	O43306	1168 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TSPY3	P0CV98	308 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TSPY8	P0CW00	308 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TFAP4	Q01664	338 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CNTN2	Q02246	1040 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	MKRN4P	Q13434	485 aa	Predicted RBP	13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	GRIN2C	Q14957	1233 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	MFSD5	Q6N075	450 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	NOL8	Q76FK4	1167 aa	Known RBP	13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CCDC144CP	Q8IYA2	1237 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	NEDD1	Q8NHV4	660 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	FGD4	Q96M96	766 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	SEC62	Q99442	399 aa	Known RBP	13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	NACAP1	Q9BZK3	213 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	FBXO40	Q9UH90	709 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ELP1	O95163	1332 aa		13.54	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ARVCF	O00192	962 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	SLC3A2	P08195	630 aa	Known RBP	13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	OAZ1	P54368	228 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	GJA9	P57773	515 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	PDE4B	Q07343	736 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	C16orf59	Q7L2K0	433 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	ARMCX2	Q7L311	632 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	GMCL1P1	Q8NEA9	526 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	CHURC1	Q8WUH1	139 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	AGBL1	Q96MI9	1066 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	TBX21	Q9UL17	535 aa		13.53	□□□□□ -0.24
PTP4A2-211	ENST00000528840	MYH7	P12883	1935 aa		13.52	□□□□□ -0.24
PTP4A2-211	ENST00000528840	GRXCR1	A8MXD5	290 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ACR	P10323	421 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	MCC	P23508	829 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	DNAJB2	P25686	324 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CST5	P28325	142 aa	Predicted RBP	13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	SNAP25	P60880	206 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	BEX3	Q00994	111 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TNFAIP2	Q03169	654 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	IK	Q13123	557 aa	Predicted RBP	13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CCDC129	Q6ZRS4	1044 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	STAG1	Q8WVM7	1258 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PPP1R12C	Q9BZL4	782 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	UPF3A	Q9H1J1	476 aa	Known RBP	13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ZNF576	Q9H609	170 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	INCENP	Q9NQS7	918 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	SYNPO2	Q9UMS6	1093 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	MROH7	Q68CQ1	1323 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ROBO3	Q96MS0	1386 aa		13.52	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TMEM265	A0A087WTH1	108 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840		A0A0U1RQG5	324 aa	Predicted RBP	13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	SOWAHB	A6NEL2	793 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TLR3	O15455	904 aa	Known RBP	13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	FDX1	P10109	184 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CSF2RA	P15509	400 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	SLC1A4	P43007	532 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	STAT2	P52630	851 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PPARA	Q07869	468 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PPIG	Q13427	754 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TMEM240	Q5SV17	173 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CCDC174	Q6PII3	467 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ZNF365	Q70YC5	407 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TMEM199	Q8N511	208 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	FAM133A	Q8N9E0	248 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TIFA	Q96CG3	184 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	TRERF1	Q96PN7	1200 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	KATNBL1	Q9H079	304 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	NAPB	Q9H115	298 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ACAD9	Q9H845	621 aa		13.51	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CTAGE5	O15320	804 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	DYNC1LI2	O43237	492 aa	Predicted RBP	13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ALAS1	P13196	640 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CYP2C18	P33260	490 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PBX2	P40425	430 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	RCSD1	Q6JBY9	416 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	CXCL17	Q6UXB2	119 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	KCTD1	Q719H9	257 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	FAM160B2	Q86V87	743 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	FAM126B	Q8IXS8	530 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	PPM1E	Q8WY54	764 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	FSD1	Q9BTV5	496 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	AP5M1	Q9H0R1	490 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	A1CF	Q9NQ94	594 aa	Known RBP	13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	RNF146	Q9NTX7	359 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	MTMR7	Q9Y216	660 aa		13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	DDX49	Q9Y6V7	483 aa	Known RBP	13.5	□□□□□ -0.25
PTP4A2-211	ENST00000528840	GREB1L	Q9C091	1923 aa	Predicted RBP	13.49	□□□□□ -0.25
PTP4A2-211	ENST00000528840	ZNF536	O15090	1300 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms