RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 DIS3Q9Y2L1 958 aaKnown RBP16.76■□□□□ 0.27
CAPN1-216ENST00000528739 NR2E3Q9Y5X4 410 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 BRCA2P51587 3418 aa16.76■□□□□ 0.27
CAPN1-216ENST00000528739 TNKSO95271 1327 aa16.75■□□□□ 0.27
CAPN1-216ENST00000528739 ERICH2A1L162 156 aa16.75■□□□□ 0.27
CAPN1-216ENST00000528739 POTEB2H3BUK9 544 aa16.75■□□□□ 0.27
CAPN1-216ENST00000528739 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
CAPN1-216ENST00000528739 CYBAP13498 195 aa16.75■□□□□ 0.27
CAPN1-216ENST00000528739 TKFCQ3LXA3 575 aa16.75■□□□□ 0.27
CAPN1-216ENST00000528739 IFIT1BQ5T764 474 aaKnown RBP16.75■□□□□ 0.27
CAPN1-216ENST00000528739 LHX8Q68G74 356 aa16.75■□□□□ 0.27
CAPN1-216ENST00000528739 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
CAPN1-216ENST00000528739 UBE2Q1Q7Z7E8 422 aa16.75■□□□□ 0.27
CAPN1-216ENST00000528739 A0A0G2JMZ2 1700 aa16.75■□□□□ 0.27
CAPN1-216ENST00000528739 H0YGN5 161 aa16.74■□□□□ 0.27
CAPN1-216ENST00000528739 SEPT4O43236 478 aa16.74■□□□□ 0.27
CAPN1-216ENST00000528739 CYP21A2P08686 494 aa16.74■□□□□ 0.27
CAPN1-216ENST00000528739 ZNF543Q08ER8 600 aa16.74■□□□□ 0.27
CAPN1-216ENST00000528739 NSMFQ6X4W1 530 aa16.74■□□□□ 0.27
CAPN1-216ENST00000528739 UBA5Q9GZZ9 404 aa16.74■□□□□ 0.27
CAPN1-216ENST00000528739 ZHX1Q9UKY1 873 aaPredicted RBP16.74■□□□□ 0.27
CAPN1-216ENST00000528739 ZNF536O15090 1300 aa16.73■□□□□ 0.27
CAPN1-216ENST00000528739 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
CAPN1-216ENST00000528739 TAL1P17542 331 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-216ENST00000528739 GPATCH4Q5T3I0 446 aaKnown RBP16.73■□□□□ 0.27
CAPN1-216ENST00000528739 GJC2Q5T442 439 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-216ENST00000528739 ENAHQ8N8S7 591 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-216ENST00000528739 ARRDC4Q8NCT1 418 aa16.73■□□□□ 0.27
CAPN1-216ENST00000528739 NCOA7Q8NI08 942 aa16.73■□□□□ 0.27
CAPN1-216ENST00000528739 SENP6Q9GZR1 1112 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-216ENST00000528739 RANBP17Q9H2T7 1088 aaKnown RBP16.73■□□□□ 0.27
CAPN1-216ENST00000528739 VAT1LQ9HCJ6 419 aa16.73■□□□□ 0.27
CAPN1-216ENST00000528739 ANO2Q9NQ90 1003 aa16.73■□□□□ 0.27
CAPN1-216ENST00000528739 RBM8AQ9Y5S9 174 aaKnown RBP16.73■□□□□ 0.27
CAPN1-216ENST00000528739 COL11A1P12107 1806 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-216ENST00000528739 KBTBD13C9JR72 458 aa16.72■□□□□ 0.27
CAPN1-216ENST00000528739 E7EWF7 191 aa16.72■□□□□ 0.27
CAPN1-216ENST00000528739 ICAM1P05362 532 aa16.72■□□□□ 0.27
CAPN1-216ENST00000528739 PARP1P09874 1014 aaKnown RBP16.72■□□□□ 0.27
CAPN1-216ENST00000528739 RARBP10826 455 aa16.72■□□□□ 0.27
CAPN1-216ENST00000528739 SART3Q15020 963 aaKnown RBP16.72■□□□□ 0.27
CAPN1-216ENST00000528739 BTNL9Q6UXG8 535 aa16.72■□□□□ 0.27
CAPN1-216ENST00000528739 CYB5R4Q7L1T6 521 aa16.72■□□□□ 0.27
CAPN1-216ENST00000528739 C7orf61Q8IZ16 206 aa16.72■□□□□ 0.27
CAPN1-216ENST00000528739 ESYT1Q9BSJ8 1104 aa16.72■□□□□ 0.27
CAPN1-216ENST00000528739 PTPDC1A2A3K4 754 aa16.71■□□□□ 0.27
CAPN1-216ENST00000528739 CNTN2Q02246 1040 aa16.71■□□□□ 0.27
CAPN1-216ENST00000528739 USH1GQ495M9 461 aa16.71■□□□□ 0.27
CAPN1-216ENST00000528739 BMP2KLQ5H9B9 411 aa16.71■□□□□ 0.27
CAPN1-216ENST00000528739 MUM1L1Q5H9M0 696 aa16.71■□□□□ 0.27
CAPN1-216ENST00000528739 CHST3Q7LGC8 479 aa16.71■□□□□ 0.27
CAPN1-216ENST00000528739 MAP4K1Q92918 833 aa16.71■□□□□ 0.27
CAPN1-216ENST00000528739 CPVLQ9H3G5 476 aa16.71■□□□□ 0.27
CAPN1-216ENST00000528739 A1CFQ9NQ94 594 aaKnown RBP16.71■□□□□ 0.27
CAPN1-216ENST00000528739 NRBP1Q9UHY1 535 aa16.71■□□□□ 0.27
CAPN1-216ENST00000528739 PFASO15067 1338 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 PARP14Q460N5 1801 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 DNAJC25-GNG10A0A024R161 153 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 SNHG28P0DPA3 235 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 AKR1A1P14550 325 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 ATN1P54259 1190 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-216ENST00000528739 WTAPQ15007 396 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 ASPRV1Q53RT3 343 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 NOL8Q76FK4 1167 aaKnown RBP16.7■□□□□ 0.26
CAPN1-216ENST00000528739 MSL3Q8N5Y2 521 aaKnown RBP16.7■□□□□ 0.26
CAPN1-216ENST00000528739 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 XPNPEP3Q9NQH7 507 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-216ENST00000528739 PNMA2Q9UL42 364 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 FAM184BQ9ULE4 1060 aa16.7■□□□□ 0.26
CAPN1-216ENST00000528739 DNM1LO00429 736 aa16.69■□□□□ 0.26
CAPN1-216ENST00000528739 IGHA2P01877 340 aa16.69■□□□□ 0.26
CAPN1-216ENST00000528739 CENPBP07199 599 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-216ENST00000528739 MNX1P50219 401 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-216ENST00000528739 ACVR2BQ13705 512 aa16.69■□□□□ 0.26
CAPN1-216ENST00000528739 BAATQ14032 418 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-216ENST00000528739 ARMCX2Q7L311 632 aa16.69■□□□□ 0.26
CAPN1-216ENST00000528739 ZNF467Q7Z7K2 595 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-216ENST00000528739 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
CAPN1-216ENST00000528739 MKI67P46013 3256 aaKnown RBP16.69■□□□□ 0.26
CAPN1-216ENST00000528739 SYNGAP1Q96PV0 1343 aa16.69■□□□□ 0.26
CAPN1-216ENST00000528739 ZNF236Q9UL36 1845 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 ASB14A6NK59 587 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 TNRC18O15417 2968 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-216ENST00000528739 SNAI1O95863 264 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-216ENST00000528739 PGK1P00558 417 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 ZNF865P0CJ78 1059 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-216ENST00000528739 CALML3P27482 149 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 CDC37Q16543 378 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-216ENST00000528739 TMEM67Q5HYA8 995 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 MAMDC4Q6UXC1 1216 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 CHRDL2Q6WN34 429 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 RNF180Q86T96 592 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 ADGRF4Q8IZF3 695 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 FERMT2Q96AC1 680 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 LSG1Q9H089 658 aaKnown RBP16.68■□□□□ 0.26
CAPN1-216ENST00000528739 ABHD16BQ9H3Z7 469 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 CYP39A1Q9NYL5 469 aa16.68■□□□□ 0.26
CAPN1-216ENST00000528739 ZMYND8Q9ULU4 1186 aaPredicted RBP16.68■□□□□ 0.26
CAPN1-216ENST00000528739 TAF6LQ9Y6J9 622 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms