RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 MICU3Q86XE3 530 aa7.2□□□□□ -1.26
MACF1-228ENST00000528611 LRRC47Q8N1G4 583 aaKnown RBP7.2□□□□□ -1.26
MACF1-228ENST00000528611 SHCBP1Q8NEM2 672 aa7.2□□□□□ -1.26
MACF1-228ENST00000528611 NKX2-3Q8TAU0 364 aa7.2□□□□□ -1.26
MACF1-228ENST00000528611 NUP133Q8WUM0 1156 aa7.2□□□□□ -1.26
MACF1-228ENST00000528611 CAPNS2Q96L46 248 aa7.2□□□□□ -1.26
MACF1-228ENST00000528611 RANBP17Q9H2T7 1088 aaKnown RBP7.2□□□□□ -1.26
MACF1-228ENST00000528611 RPAP3Q9H6T3 665 aaPredicted RBP7.2□□□□□ -1.26
MACF1-228ENST00000528611 SLC38A10Q9HBR0 1119 aa7.2□□□□□ -1.26
MACF1-228ENST00000528611 FAM217BQ9NTX9 383 aaPredicted RBP7.2□□□□□ -1.26
MACF1-228ENST00000528611 MORF4L1Q9UBU8 362 aa7.2□□□□□ -1.26
MACF1-228ENST00000528611 SEC63Q9UGP8 760 aaKnown RBP7.2□□□□□ -1.26
MACF1-228ENST00000528611 FBXO40Q9UH90 709 aa7.2□□□□□ -1.26
MACF1-228ENST00000528611 WDR33Q9C0J8 1336 aaKnown RBP7.2□□□□□ -1.26
MACF1-228ENST00000528611 ESYT2A0FGR8 921 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 POTEB3A0JP26 581 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 VWA5AO00534 786 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 STRNO43815 780 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 FLOT1O75955 427 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 GNRH1P01148 92 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 ICAM1P05362 532 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 CPA1P15085 419 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 CALML3P27482 149 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 ADD1P35611 737 aaKnown RBP7.19□□□□□ -1.26
MACF1-228ENST00000528611 EMP3P54852 163 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 FMR1Q06787 632 aaKnown RBP eCLIP7.19□□□□□ -1.26
MACF1-228ENST00000528611 SSRP1Q08945 709 aaKnown RBP7.19□□□□□ -1.26
MACF1-228ENST00000528611 ARHGEF6Q15052 776 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 PFKFB3Q16875 520 aaPredicted RBP7.19□□□□□ -1.26
MACF1-228ENST00000528611 CCDC96Q2M329 555 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 GPAT2Q6NUI2 795 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 POTEBQ6S5H4 581 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 NBPF11Q86T75 865 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 ABRAQ8N0Z2 381 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 CHST13Q8NET6 341 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 CCDC148Q8NFR7 591 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 BICD2Q8TD16 824 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 BRI3BPQ8WY22 251 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 TCEANC2Q96MN5 208 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 AMNQ9BXJ7 453 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 LRRC2Q9BYS8 371 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 TANGO6Q9C0B7 1094 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 MROH8Q9H579 483 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 ZFYVE28Q9HCC9 887 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 DAXXQ9UER7 740 aaPredicted RBP7.19□□□□□ -1.26
MACF1-228ENST00000528611 PRR12Q9ULL5 1215 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 FZD1Q9UP38 647 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 THSD7BQ9C0I4 1608 aa7.19□□□□□ -1.26
MACF1-228ENST00000528611 SPDYE16A6NNV3 312 aaPredicted RBP7.18□□□□□ -1.26
MACF1-228ENST00000528611 BTBD19C9JJ37 291 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 PDHXO00330 501 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 TLR2O60603 784 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 GNA11P29992 359 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 CDC27P30260 824 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 HERVK_113P62684 666 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 KIF23Q02241 960 aaPredicted RBP7.18□□□□□ -1.26
MACF1-228ENST00000528611 IRF5Q13568 498 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 FAM83BQ5T0W9 1011 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 GADL1Q6ZQY3 521 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 MCF2L2Q86YR7 1114 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 RIOX2Q8IUF8 465 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 ADGRF4Q8IZF3 695 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 SRBD1Q8N5C6 995 aaKnown RBP7.18□□□□□ -1.26
MACF1-228ENST00000528611 PDCD7Q8N8D1 485 aaKnown RBP7.18□□□□□ -1.26
MACF1-228ENST00000528611 HS3ST6Q96QI5 342 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 TEX13BQ9BXU2 312 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 ASCC2Q9H1I8 757 aaPredicted RBP7.18□□□□□ -1.26
MACF1-228ENST00000528611 JMJD4Q9H9V9 463 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 SENP2Q9HC62 589 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 GPHNQ9NQX3 736 aaPredicted RBP7.18□□□□□ -1.26
MACF1-228ENST00000528611 BARHL2Q9NY43 387 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 MRPL11Q9Y3B7 192 aaKnown RBP7.18□□□□□ -1.26
MACF1-228ENST00000528611 RBM19Q9Y4C8 960 aaKnown RBP7.18□□□□□ -1.26
MACF1-228ENST00000528611 CTDP1Q9Y5B0 961 aaPredicted RBP7.18□□□□□ -1.26
MACF1-228ENST00000528611 ABCB11O95342 1321 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 CNTNAP5Q8WYK1 1306 aa7.18□□□□□ -1.26
MACF1-228ENST00000528611 B4DLN1 442 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 PIK3CDO00329 1044 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 CYTH3O43739 400 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 FOSP01100 380 aaPredicted RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 HSP90AA1P07900 732 aaKnown RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 SCG2P13521 617 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 STAT3P40763 770 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 MRPL12P52815 198 aaKnown RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 IKQ13123 557 aaPredicted RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 COL9A3Q14050 684 aaPredicted RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 SHROOM1Q2M3G4 852 aaPredicted RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 KIAA1755Q5JYT7 1200 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 CYP4F22Q6NT55 531 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 KCTD1Q719H9 257 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 FBXO11Q86XK2 927 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 CLEC10AQ8IUN9 316 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 SPICE1Q8N0Z3 855 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 STAG2Q8N3U4 1231 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 FAM184AQ8NB25 1140 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 DAGLBQ8NCG7 672 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 NSUN7Q8NE18 718 aaKnown RBP7.17□□□□□ -1.26
MACF1-228ENST00000528611 REPS2Q8NFH8 660 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 GPRC5AQ8NFJ5 357 aa7.17□□□□□ -1.26
MACF1-228ENST00000528611 SMCR8Q8TEV9 937 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms