RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 GNAT2P19087 354 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 ZBED6P86452 979 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 SLC7A5Q01650 507 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 VGLL2Q8N8G2 317 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 RETREG2Q8NC44 543 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 EXOC1Q9NV70 894 aa16.37■□□□□ 0.21
CAPN1-214ENST00000528165 TNKSO95271 1327 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 TIAM2Q8IVF5 1701 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 SRGNP10124 158 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 TRIM28Q13263 835 aaKnown RBP16.36■□□□□ 0.21
CAPN1-214ENST00000528165 CCDC181Q5TID7 509 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 SPATA5Q8NB90 893 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 TSEN2Q8NCE0 465 aaKnown RBP16.36■□□□□ 0.21
CAPN1-214ENST00000528165 STIM2Q9P246 746 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 MEFVO15553 781 aaPredicted RBP16.36■□□□□ 0.21
CAPN1-214ENST00000528165 ZEB2O60315 1214 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 STAT6P42226 847 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 PMS1P54277 932 aaKnown RBP16.36■□□□□ 0.21
CAPN1-214ENST00000528165 MRPS25P82663 173 aaKnown RBP16.36■□□□□ 0.21
CAPN1-214ENST00000528165 MICALCLQ6ZW33 695 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 CCDC42Q96M95 316 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 LRWD1Q9UFC0 647 aa16.36■□□□□ 0.21
CAPN1-214ENST00000528165 DISP2A7MBM2 1401 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 PSMA7O14818 248 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 MCM7P33993 719 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 ZNF572Q7Z3I7 529 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-214ENST00000528165 LCORLQ8N3X6 602 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 TNFRSF25Q93038 417 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 TTYH3Q9C0H2 523 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 MYO1FO00160 1098 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 FSBPO95073 299 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 ATP1A2P50993 1020 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 TBC1D8BQ0IIM8 1120 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 SYNE4Q8N205 404 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 SMCR8Q8TEV9 937 aaPredicted RBP16.35■□□□□ 0.21
CAPN1-214ENST00000528165 TUBGCP2Q9BSJ2 902 aa16.35■□□□□ 0.21
CAPN1-214ENST00000528165 CHRM1P11229 460 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-214ENST00000528165 NNTQ13423 1086 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 KCTD16Q68DU8 428 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 ESR2Q92731 530 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 CAVIN3Q969G5 261 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 SOS2Q07890 1332 aaPredicted RBP16.34■□□□□ 0.21
CAPN1-214ENST00000528165 PRLRP16471 622 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 TCP1P17987 556 aaKnown RBP16.34■□□□□ 0.21
CAPN1-214ENST00000528165 FNTAP49354 379 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 MMP14P50281 582 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 SEC23AQ15436 765 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 KIF6Q6ZMV9 814 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 PIK3AP1Q6ZUJ8 805 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 CATIPQ7Z7H3 387 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 SH2D3CQ8N5H7 860 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 OSBPL9Q96SU4 736 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 CAPN6Q9Y6Q1 641 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 MYH13Q9UKX3 1938 aa16.34■□□□□ 0.21
CAPN1-214ENST00000528165 PLEKHA8P1O95397 391 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 PAFAH1B1P43034 410 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 KLK7P49862 253 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 FUT2Q10981 343 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 IL17AQ16552 155 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 C8orf74Q6P047 294 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 RASSF8Q8NHQ8 419 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 NOC3LQ8WTT2 800 aaKnown RBP16.33■□□□□ 0.21
CAPN1-214ENST00000528165 ZIM3Q96PE6 472 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 ALS2CR12Q96Q35 445 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 JPH2Q9BR39 696 aaPredicted RBP16.33■□□□□ 0.21
CAPN1-214ENST00000528165 IFIH1Q9BYX4 1025 aaKnown RBP16.33■□□□□ 0.21
CAPN1-214ENST00000528165 HYOU1Q9Y4L1 999 aa16.33■□□□□ 0.21
CAPN1-214ENST00000528165 CCDC172P0C7W6 258 aa16.33■□□□□ 0.2
CAPN1-214ENST00000528165 PUM3Q15397 648 aaKnown RBP16.33■□□□□ 0.2
CAPN1-214ENST00000528165 HAUS3Q68CZ6 603 aa16.33■□□□□ 0.2
CAPN1-214ENST00000528165 PSMB7Q99436 277 aa16.33■□□□□ 0.2
CAPN1-214ENST00000528165 RBM28Q9NW13 759 aaKnown RBP16.33■□□□□ 0.2
CAPN1-214ENST00000528165 MINDY4BA8MYZ0 360 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 TRAPPC10P48553 1259 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 CTSWP56202 376 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 CDK17Q00537 523 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 NPY5RQ15761 445 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 NFRKBQ6P4R8 1299 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 KRT26Q7Z3Y9 468 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 CSGALNACT2Q8N6G5 542 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 LPIN2Q92539 896 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 SH2D4AQ9H788 454 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 SPATA31A3Q5VYP0 1347 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 PNPLA7Q6ZV29 1317 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 RASSF10A6NK89 507 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 MOCS3O95396 460 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 KRT14P02533 472 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 TNFRSF8P28908 595 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 LSP1P33241 339 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 LONP1P36776 959 aaKnown RBP16.32■□□□□ 0.2
CAPN1-214ENST00000528165 DDR1Q08345 913 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 CFAP58Q5T655 872 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 RPAINQ86UA6 219 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 EPN3Q9H201 632 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 MLXIPQ9HAP2 919 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 TRPM3Q9HCF6 1732 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-214ENST00000528165 ZNF263O14978 683 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 CXCR5P32302 372 aa16.32■□□□□ 0.2
CAPN1-214ENST00000528165 NAP1L1P55209 391 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms