RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 ENAHQ8N8S7 591 aaPredicted RBP30.93■■■□□ 2.54
TSPAN4-217ENST00000527644 PNMA1Q8ND90 353 aa30.93■■■□□ 2.54
TSPAN4-217ENST00000527644 TRPV1Q8NER1 839 aa30.93■■■□□ 2.54
TSPAN4-217ENST00000527644 HTATIP2Q9BUP3 242 aa30.93■■■□□ 2.54
TSPAN4-217ENST00000527644 TNKSO95271 1327 aa30.93■■■□□ 2.54
TSPAN4-217ENST00000527644 DNAJC25-GNG10A0A024R161 153 aa30.92■■■□□ 2.54
TSPAN4-217ENST00000527644 CCDC174Q6PII3 467 aa30.92■■■□□ 2.54
TSPAN4-217ENST00000527644 NECAB2Q7Z6G3 386 aa30.92■■■□□ 2.54
TSPAN4-217ENST00000527644 TINF2Q9BSI4 451 aa30.92■■■□□ 2.54
TSPAN4-217ENST00000527644 ESYT1Q9BSJ8 1104 aa30.92■■■□□ 2.54
TSPAN4-217ENST00000527644 RANBP17Q9H2T7 1088 aaKnown RBP30.92■■■□□ 2.54
TSPAN4-217ENST00000527644 ACAD9Q9H845 621 aa30.92■■■□□ 2.54
TSPAN4-217ENST00000527644 DDX20Q9UHI6 824 aaKnown RBP30.92■■■□□ 2.54
TSPAN4-217ENST00000527644 SNAP25P60880 206 aa30.91■■■□□ 2.54
TSPAN4-217ENST00000527644 GPATCH4Q5T3I0 446 aaKnown RBP30.91■■■□□ 2.54
TSPAN4-217ENST00000527644 PAWRQ96IZ0 340 aaKnown RBP30.91■■■□□ 2.54
TSPAN4-217ENST00000527644 HOMER2Q9NSB8 354 aa30.91■■■□□ 2.54
TSPAN4-217ENST00000527644 NRBP1Q9UHY1 535 aa30.91■■■□□ 2.54
TSPAN4-217ENST00000527644 RBM8AQ9Y5S9 174 aaKnown RBP30.91■■■□□ 2.54
TSPAN4-217ENST00000527644 MSL3Q8N5Y2 521 aaKnown RBP30.9■■■□□ 2.54
TSPAN4-217ENST00000527644 TRERF1Q96PN7 1200 aa30.9■■■□□ 2.54
TSPAN4-217ENST00000527644 RNF146Q9NTX7 359 aa30.9■■■□□ 2.54
TSPAN4-217ENST00000527644 PLXNA1Q9UIW2 1896 aa30.89■■■□□ 2.54
TSPAN4-217ENST00000527644 ICAM1P05362 532 aa30.89■■■□□ 2.54
TSPAN4-217ENST00000527644 ALAS1P13196 640 aa30.89■■■□□ 2.54
TSPAN4-217ENST00000527644 MNX1P50219 401 aaPredicted RBP30.89■■■□□ 2.54
TSPAN4-217ENST00000527644 CYB5R4Q7L1T6 521 aa30.89■■■□□ 2.54
TSPAN4-217ENST00000527644 DIS3LQ8TF46 1054 aaKnown RBP30.89■■■□□ 2.54
TSPAN4-217ENST00000527644 LSG1Q9H089 658 aaKnown RBP30.89■■■□□ 2.54
TSPAN4-217ENST00000527644 E7EWF7 191 aa30.88■■■□□ 2.53
TSPAN4-217ENST00000527644 PRAMEF19Q5SWL8 479 aa30.88■■■□□ 2.53
TSPAN4-217ENST00000527644 NCOA7Q8NI08 942 aa30.88■■■□□ 2.53
TSPAN4-217ENST00000527644 DPF3Q92784 378 aa30.88■■■□□ 2.53
TSPAN4-217ENST00000527644 CCPG1Q9ULG6 757 aa30.88■■■□□ 2.53
TSPAN4-217ENST00000527644 SEPT4O43236 478 aa30.87■■■□□ 2.53
TSPAN4-217ENST00000527644 IFIT1BQ5T764 474 aaKnown RBP30.87■■■□□ 2.53
TSPAN4-217ENST00000527644 ZNF467Q7Z7K2 595 aaPredicted RBP30.87■■■□□ 2.53
TSPAN4-217ENST00000527644 RALYLQ86SE5 291 aaKnown RBP30.87■■■□□ 2.53
TSPAN4-217ENST00000527644 PNMA2Q9UL42 364 aa30.87■■■□□ 2.53
TSPAN4-217ENST00000527644 SEC23AQ15436 765 aa30.86■■■□□ 2.53
TSPAN4-217ENST00000527644 MAMDC4Q6UXC1 1216 aa30.86■■■□□ 2.53
TSPAN4-217ENST00000527644 TAF6LQ9Y6J9 622 aa30.86■■■□□ 2.53
TSPAN4-217ENST00000527644 SYNGAP1Q96PV0 1343 aa30.85■■■□□ 2.53
TSPAN4-217ENST00000527644 GOLGA8HP0CJ92 632 aa30.85■■■□□ 2.53
TSPAN4-217ENST00000527644 CASC1Q6TDU7 716 aa30.85■■■□□ 2.53
TSPAN4-217ENST00000527644 C11orf49Q9H6J7 331 aa30.85■■■□□ 2.53
TSPAN4-217ENST00000527644 A1CFQ9NQ94 594 aaKnown RBP30.85■■■□□ 2.53
TSPAN4-217ENST00000527644 PFASO15067 1338 aa30.84■■■□□ 2.53
TSPAN4-217ENST00000527644 ASPRV1Q53RT3 343 aa30.84■■■□□ 2.53
TSPAN4-217ENST00000527644 STOX1Q6ZVD7 989 aa30.84■■■□□ 2.53
TSPAN4-217ENST00000527644 ANO2Q9NQ90 1003 aa30.84■■■□□ 2.53
TSPAN4-217ENST00000527644 CNPY2Q9Y2B0 182 aa30.84■■■□□ 2.53
TSPAN4-217ENST00000527644 POTEB2H3BUK9 544 aa30.83■■■□□ 2.53
TSPAN4-217ENST00000527644 MUM1L1Q5H9M0 696 aa30.83■■■□□ 2.53
TSPAN4-217ENST00000527644 ERICH2A1L162 156 aa30.82■■■□□ 2.52
TSPAN4-217ENST00000527644 IFIT3O14879 490 aaKnown RBP30.82■■■□□ 2.52
TSPAN4-217ENST00000527644 CDC45O75419 566 aa30.82■■■□□ 2.52
TSPAN4-217ENST00000527644 CENPBP07199 599 aaPredicted RBP30.82■■■□□ 2.52
TSPAN4-217ENST00000527644 PARP1P09874 1014 aaKnown RBP30.82■■■□□ 2.52
TSPAN4-217ENST00000527644 SART3Q15020 963 aaKnown RBP30.82■■■□□ 2.52
TSPAN4-217ENST00000527644 FAM133AQ8N9E0 248 aa30.82■■■□□ 2.52
TSPAN4-217ENST00000527644 UBA5Q9GZZ9 404 aa30.82■■■□□ 2.52
TSPAN4-217ENST00000527644 ZNF865P0CJ78 1059 aaPredicted RBP30.81■■■□□ 2.52
TSPAN4-217ENST00000527644 FGD4Q96M96 766 aa30.81■■■□□ 2.52
TSPAN4-217ENST00000527644 FRMPD3Q5JV73 1810 aa30.81■■■□□ 2.52
TSPAN4-217ENST00000527644 WDR19Q8NEZ3 1342 aa30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 SNAI1O95863 264 aaPredicted RBP30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 COL6A1P12109 1028 aa30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 TAL1P17542 331 aaPredicted RBP30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 CNTN2Q02246 1040 aa30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 NECTIN1Q15223 517 aa30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 ERICH6BQ5W0A0 696 aa30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 ARRDC4Q8NCT1 418 aa30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 CYP39A1Q9NYL5 469 aa30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 NR2E3Q9Y5X4 410 aa30.8■■■□□ 2.52
TSPAN4-217ENST00000527644 SLC27A2O14975 620 aa30.79■■■□□ 2.52
TSPAN4-217ENST00000527644 ANO1Q5XXA6 986 aa30.79■■■□□ 2.52
TSPAN4-217ENST00000527644 MB21D2Q8IYB1 491 aaPredicted RBP30.79■■■□□ 2.52
TSPAN4-217ENST00000527644 CPVLQ9H3G5 476 aa30.79■■■□□ 2.52
TSPAN4-217ENST00000527644 CEP290O15078 2479 aa30.79■■■□□ 2.52
TSPAN4-217ENST00000527644 DNM1LO00429 736 aa30.78■■■□□ 2.52
TSPAN4-217ENST00000527644 EVI5O60447 810 aa30.78■■■□□ 2.52
TSPAN4-217ENST00000527644 WTAPQ15007 396 aa30.78■■■□□ 2.52
TSPAN4-217ENST00000527644 CREB3L3Q68CJ9 461 aa30.78■■■□□ 2.52
TSPAN4-217ENST00000527644 NSMFQ6X4W1 530 aa30.78■■■□□ 2.52
TSPAN4-217ENST00000527644 CHST3Q7LGC8 479 aa30.78■■■□□ 2.52
TSPAN4-217ENST00000527644 ADGRF4Q8IZF3 695 aa30.78■■■□□ 2.52
TSPAN4-217ENST00000527644 CDKN2AIPQ9NXV6 580 aaPredicted RBP30.78■■■□□ 2.52
TSPAN4-217ENST00000527644 SMCHD1A6NHR9 2005 aa30.78■■■□□ 2.52
TSPAN4-217ENST00000527644 H0YGN5 161 aa30.77■■■□□ 2.52
TSPAN4-217ENST00000527644 RARBP10826 455 aa30.77■■■□□ 2.52
TSPAN4-217ENST00000527644 AKR1A1P14550 325 aa30.77■■■□□ 2.52
TSPAN4-217ENST00000527644 ARMCX2Q7L311 632 aa30.77■■■□□ 2.52
TSPAN4-217ENST00000527644 ABHD16BQ9H3Z7 469 aa30.77■■■□□ 2.52
TSPAN4-217ENST00000527644 SOWAHBA6NEL2 793 aa30.76■■■□□ 2.51
TSPAN4-217ENST00000527644 ASB14A6NK59 587 aa30.76■■■□□ 2.51
TSPAN4-217ENST00000527644 ANTXR2P58335 489 aa30.76■■■□□ 2.51
TSPAN4-217ENST00000527644 CDC37Q16543 378 aaPredicted RBP30.76■■■□□ 2.51
TSPAN4-217ENST00000527644 TMEM67Q5HYA8 995 aa30.76■■■□□ 2.51
TSPAN4-217ENST00000527644 IGDCC4Q8TDY8 1250 aa30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms