RNA–Protein interactions for RNA: ENST00000527547.5

CDC27-204, Transcript of cell division cycle 27, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC27, Length 2,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-204ENST00000527547 PCDHA1Q9Y5I3 950 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 PHIPQ8WWQ0 1821 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 CALML3P27482 149 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 NF2P35240 595 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 IREB2P48200 963 aaKnown RBP10.54□□□□□ -0.72
CDC27-204ENST00000527547 NOL9Q5SY16 702 aaKnown RBP10.54□□□□□ -0.72
CDC27-204ENST00000527547 JAKMIP3Q5VZ66 844 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 LINC00301Q8NCQ3 95 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 CCDC148Q8NFR7 591 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 RPAP3Q9H6T3 665 aaPredicted RBP10.54□□□□□ -0.72
CDC27-204ENST00000527547 AS3MTQ9HBK9 375 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 RCOR1Q9UKL0 485 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 AFG3L2Q9Y4W6 797 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 CSADQ9Y600 493 aa10.54□□□□□ -0.72
CDC27-204ENST00000527547 DCAF8L1A6NGE4 600 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 STK38Q15208 465 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 OTUD5Q96G74 571 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 PAPPA2Q9BXP8 1791 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 SMCHD1A6NHR9 2005 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 WDR46O15213 610 aaKnown RBP10.53□□□□□ -0.72
CDC27-204ENST00000527547 ME1P48163 572 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 CAVIN1Q6NZI2 390 aaKnown RBP10.53□□□□□ -0.72
CDC27-204ENST00000527547 LPAR1Q92633 364 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 WNK4Q96J92 1243 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 C6orf50Q9HD87 102 aa10.53□□□□□ -0.72
CDC27-204ENST00000527547 USP17L15C9J2P7 530 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP17L13C9JLJ4 530 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP17L11C9JVI0 530 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP17L18D6R9N7 530 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP17L22D6RA61 530 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP17L17D6RBQ6 530 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP17L19D6RCP7 530 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP17L20D6RJB6 530 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 FLOT1O75955 427 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.73
CDC27-204ENST00000527547 ADCY7P51828 1080 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 UBE2HP62256 183 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP17L24Q0WX57 530 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 PTPAQ15257 358 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 ZNF174Q15697 407 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 INF2Q27J81 1249 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP17L6PQ6QN14 398 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 FBXO11Q86XK2 927 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 CCDC12Q8WUD4 166 aaPredicted RBP10.52□□□□□ -0.73
CDC27-204ENST00000527547 CHURC1Q8WUH1 139 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 FEM1BQ9UK73 627 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 PCDHA7Q9UN72 937 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 ELP1O95163 1332 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 IRF6O14896 467 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 SPTLC2O15270 562 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 LIG1P18858 919 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 USP14P54578 494 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 KLHL40Q2TBA0 621 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 RILPL1Q5EBL4 403 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 ANKRD13AQ8IZ07 590 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 DAGLBQ8NCG7 672 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 AMNQ9BXJ7 453 aa10.52□□□□□ -0.73
CDC27-204ENST00000527547 CCDC194A0A1B0GVG4 234 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 GNA11P29992 359 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 SLC39A14Q15043 492 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 CSPP1Q1MSJ5 1256 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 ATL3Q6DD88 541 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 CPXCR1Q8N123 301 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 REXO1Q8N1G1 1221 aaKnown RBP10.51□□□□□ -0.73
CDC27-204ENST00000527547 TBC1D5Q92609 795 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 AGBL1Q96MI9 1066 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 SLF1Q9BQI6 1058 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 RANBP17Q9H2T7 1088 aaKnown RBP10.51□□□□□ -0.73
CDC27-204ENST00000527547 PSTPIP2Q9H939 334 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 TMEM63CQ9P1W3 806 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 ESYT2A0FGR8 921 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 hCG_1984214I3L0E3 225 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 OPLAHO14841 1288 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 YEATS4O95619 227 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 PTMSP20962 102 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 MCM7P33993 719 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 GRIN1Q05586 938 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 SKOR2Q2VWA4 1001 aaPredicted RBP10.51□□□□□ -0.73
CDC27-204ENST00000527547 TREML2Q5T2D2 321 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 FAM160B2Q86V87 743 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 LDHDQ86WU2 507 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 ZNF713Q8N859 430 aaPredicted RBP10.51□□□□□ -0.73
CDC27-204ENST00000527547 BICD2Q8TD16 824 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 ATG4CQ96DT6 458 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 P2RX7Q99572 595 aaKnown RBP10.51□□□□□ -0.73
CDC27-204ENST00000527547 RIC8AQ9NPQ8 531 aa10.51□□□□□ -0.73
CDC27-204ENST00000527547 GOLGA6L4A6NEF3 574 aa10.5□□□□□ -0.73
CDC27-204ENST00000527547 PEX10O60683 326 aa10.5□□□□□ -0.73
CDC27-204ENST00000527547 HOXA13P31271 388 aaPredicted RBP10.5□□□□□ -0.73
CDC27-204ENST00000527547 MKRN3Q13064 507 aaKnown RBP10.5□□□□□ -0.73
CDC27-204ENST00000527547 MAP3K11Q16584 847 aa10.5□□□□□ -0.73
CDC27-204ENST00000527547 SPECC1Q5M775 1068 aa10.5□□□□□ -0.73
CDC27-204ENST00000527547 TTC38Q5R3I4 469 aa10.5□□□□□ -0.73
CDC27-204ENST00000527547 GALNT17Q6IS24 598 aa10.5□□□□□ -0.73
CDC27-204ENST00000527547 ARMC9Q7Z3E5 817 aa10.5□□□□□ -0.73
CDC27-204ENST00000527547 PRPF38AQ8NAV1 312 aaKnown RBP10.5□□□□□ -0.73
CDC27-204ENST00000527547 OPTNQ96CV9 577 aa10.5□□□□□ -0.73
CDC27-204ENST00000527547 GOLPH3LQ9H4A5 285 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms