RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SLC15A2Q16348 729 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 PKN1Q16512 942 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 ADGRA1Q86SQ6 560 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 RASSF8Q8NHQ8 419 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 FAM71BQ8TC56 605 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 SHISA4Q96DD7 197 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 FAM84BQ96KN1 310 aaPredicted RBP14.05□□□□□ -0.16
CAPN1-208ENST00000527323 RTL9Q8NET4 1388 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 FGFR2P21802 821 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 GPSM2P81274 684 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 TCP11X2Q5H9J9 407 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 SRLQ86TD4 932 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 CAPZA3Q96KX2 299 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 KCNQ5Q9NR82 932 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 RWDD2AQ9UIY3 292 aa14.05□□□□□ -0.16
CAPN1-208ENST00000527323 LRRIQ3A6PVS8 624 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-208ENST00000527323 UFL1O94874 794 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 NLRP5P59047 1200 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 TRIM14Q14142 442 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 PIK3AP1Q6ZUJ8 805 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 HDAC6Q9UBN7 1215 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 XDHP47989 1333 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 PRPF3O43395 683 aaKnown RBP14.04□□□□□ -0.16
CAPN1-208ENST00000527323 NDUFA10O95299 355 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 PRDX5P30044 214 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 PPP2R5BQ15173 497 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 GDAP1L1Q96MZ0 367 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 BSDC1Q9NW68 430 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-208ENST00000527323 LUC7L2Q9Y383 392 aaKnown RBP14.04□□□□□ -0.16
CAPN1-208ENST00000527323 MYH3P11055 1940 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 R3HDM1Q15032 1099 aaKnown RBP14.04□□□□□ -0.16
CAPN1-208ENST00000527323 CCDC122Q5T0U0 273 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 FOXR1Q6PIV2 292 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.04□□□□□ -0.16
CAPN1-208ENST00000527323 KIAA1328Q86T90 577 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 ENAHQ8N8S7 591 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-208ENST00000527323 OR8K1Q8NGG5 319 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 ZSCAN10Q96SZ4 725 aaPredicted RBP14.04□□□□□ -0.16
CAPN1-208ENST00000527323 FAM204AQ9H8W3 233 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 TFR2Q9UP52 801 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 GDAQ9Y2T3 454 aa14.04□□□□□ -0.16
CAPN1-208ENST00000527323 ANKRD36CQ5JPF3 1778 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 CYP2D7A0A087X1C5 515 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 LRRC10BA6NIK2 292 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 GTPBP6O43824 516 aaPredicted RBP14.03□□□□□ -0.16
CAPN1-208ENST00000527323 SRGAP2O75044 1071 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 RCAN1P53805 252 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 DYNLL1P63167 89 aaKnown RBP14.03□□□□□ -0.16
CAPN1-208ENST00000527323 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 CAGE1Q8TC20 777 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 MTA3Q9BTC8 594 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 MAGEB6P1A0A0J9YX57 407 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 SEC23AQ15436 765 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 STK32BQ9NY57 414 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 NID2Q14112 1375 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 AKAP11Q9UKA4 1901 aa14.03□□□□□ -0.16
CAPN1-208ENST00000527323 TTC26A0AVF1 554 aa14.02□□□□□ -0.16
CAPN1-208ENST00000527323 ZMYND10O75800 440 aa14.02□□□□□ -0.16
CAPN1-208ENST00000527323 RPN1P04843 607 aaKnown RBP14.02□□□□□ -0.16
CAPN1-208ENST00000527323 DIXDC1Q155Q3 683 aa14.02□□□□□ -0.16
CAPN1-208ENST00000527323 MED4Q9NPJ6 270 aa14.02□□□□□ -0.16
CAPN1-208ENST00000527323 RMND1Q9NWS8 449 aa14.02□□□□□ -0.16
CAPN1-208ENST00000527323 SAR1BQ9Y6B6 198 aa14.02□□□□□ -0.16
CAPN1-208ENST00000527323 DDX60Q8IY21 1712 aaKnown RBP14.02□□□□□ -0.16
CAPN1-208ENST00000527323 ZNF804BA4D1E1 1349 aa14.02□□□□□ -0.17
CAPN1-208ENST00000527323 PARP1P09874 1014 aaKnown RBP14.02□□□□□ -0.17
CAPN1-208ENST00000527323 FECHP22830 423 aa14.02□□□□□ -0.17
CAPN1-208ENST00000527323 PRCPP42785 496 aa14.02□□□□□ -0.17
CAPN1-208ENST00000527323 ATP2C1P98194 919 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-208ENST00000527323 MAP9Q49MG5 647 aa14.02□□□□□ -0.17
CAPN1-208ENST00000527323 ZNF658Q5TYW1 1059 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-208ENST00000527323 PCMTD1Q96MG8 357 aaPredicted RBP14.02□□□□□ -0.17
CAPN1-208ENST00000527323 MYH7P12883 1935 aa14.02□□□□□ -0.17
CAPN1-208ENST00000527323 TRIM49BA6NDI0 452 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 RNF40O75150 1001 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 IPO7O95373 1038 aaKnown RBP14.01□□□□□ -0.17
CAPN1-208ENST00000527323 AMPD2Q01433 879 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 SLC10A5Q5PT55 438 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 MSL3Q8N5Y2 521 aaKnown RBP14.01□□□□□ -0.17
CAPN1-208ENST00000527323 CTCFLQ8NI51 663 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-208ENST00000527323 MMS19Q96T76 1030 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 PLEKHA4Q9H4M7 779 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 HAUS4Q9H6D7 363 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 RBM28Q9NW13 759 aaKnown RBP14.01□□□□□ -0.17
CAPN1-208ENST00000527323 MAGEC2Q9UBF1 373 aaPredicted RBP14.01□□□□□ -0.17
CAPN1-208ENST00000527323 POLLQ9UGP5 575 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 ANKRD65E5RJM6 399 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 STAT6P42226 847 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 PYM1Q9BRP8 204 aaKnown RBP14.01□□□□□ -0.17
CAPN1-208ENST00000527323 LY75O60449 1722 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 TNRC6CQ9HCJ0 1690 aaKnown RBP14.01□□□□□ -0.17
CAPN1-208ENST00000527323 H7C1D1 291 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 ATP1A1P05023 1023 aaKnown RBP14.01□□□□□ -0.17
CAPN1-208ENST00000527323 MCM3P25205 808 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 USP14P54578 494 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 CAVIN4Q5BKX8 364 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 WDR93Q6P2C0 686 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 AFAP1L1Q8TED9 768 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 MTRQ99707 1265 aa14.01□□□□□ -0.17
CAPN1-208ENST00000527323 REXO2Q9Y3B8 237 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms