RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 TANGO6Q9C0B7 1094 aa21.58■■□□□ 1.04
SMPD1-203ENST00000527275 RPAP3Q9H6T3 665 aaPredicted RBP21.58■■□□□ 1.04
SMPD1-203ENST00000527275 TMOD4Q9NZQ9 345 aa21.58■■□□□ 1.04
SMPD1-203ENST00000527275 VPS54Q9P1Q0 977 aa21.58■■□□□ 1.04
SMPD1-203ENST00000527275 PRR12Q9ULL5 1215 aa21.58■■□□□ 1.04
SMPD1-203ENST00000527275 GJA5P36382 358 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 KIF23Q02241 960 aaPredicted RBP21.57■■□□□ 1.04
SMPD1-203ENST00000527275 KRT40Q6A162 431 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 SAMD1Q6SPF0 538 aaPredicted RBP21.57■■□□□ 1.04
SMPD1-203ENST00000527275 CHURC1Q8WUH1 139 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 MTMR8Q96EF0 704 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 PGBD1Q96JS3 809 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 FEM1BQ9UK73 627 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 KCNH4Q9UQ05 1017 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 CXCL11O14625 94 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 HUNKP57058 714 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 KIFC2Q96AC6 838 aa21.57■■□□□ 1.04
SMPD1-203ENST00000527275 FTOQ9C0B1 505 aaKnown RBP eCLIP21.57■■□□□ 1.04
SMPD1-203ENST00000527275 SNAP25P60880 206 aa21.56■■□□□ 1.04
SMPD1-203ENST00000527275 TRIM29Q14134 588 aa21.56■■□□□ 1.04
SMPD1-203ENST00000527275 HEATR3Q7Z4Q2 680 aa21.56■■□□□ 1.04
SMPD1-203ENST00000527275 RBSNQ9H1K0 784 aa21.56■■□□□ 1.04
SMPD1-203ENST00000527275 A0A0G2JLL6 359 aaPredicted RBP21.55■■□□□ 1.04
SMPD1-203ENST00000527275 PNMA6FA0A0J9YX94 578 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 ZBTB5O15062 677 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 PLA2G6O60733 806 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 WWC2Q6AWC2 1192 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 PRRT2Q7Z6L0 340 aaPredicted RBP21.55■■□□□ 1.04
SMPD1-203ENST00000527275 KCNJ14Q9UNX9 436 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 KIF28PB7ZC32 967 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 FLOT1O75955 427 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 LIG1P18858 919 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 CDC37Q16543 378 aaPredicted RBP21.55■■□□□ 1.04
SMPD1-203ENST00000527275 TYW1BQ6NUM6 668 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 FAM160B2Q86V87 743 aa21.55■■□□□ 1.04
SMPD1-203ENST00000527275 PPP1R11O60927 126 aaPredicted RBP21.54■■□□□ 1.04
SMPD1-203ENST00000527275 XBP1P17861 261 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 NASPP49321 788 aaPredicted RBP21.54■■□□□ 1.04
SMPD1-203ENST00000527275 QRICH1Q2TAL8 776 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 SAPCD2Q86UD0 394 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 PRPF38AQ8NAV1 312 aaKnown RBP21.54■■□□□ 1.04
SMPD1-203ENST00000527275 BARHL2Q9NY43 387 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 RTEL1Q9NZ71 1219 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 MKRN3Q13064 507 aaKnown RBP21.54■■□□□ 1.04
SMPD1-203ENST00000527275 TREML2Q5T2D2 321 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 MYSM1Q5VVJ2 828 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 BICD2Q8TD16 824 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 SLF1Q9BQI6 1058 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 TSPY26PQ9H489 355 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 MYH15Q9Y2K3 1946 aa21.54■■□□□ 1.04
SMPD1-203ENST00000527275 WNK4Q96J92 1243 aa21.53■■□□□ 1.04
SMPD1-203ENST00000527275 STXBP3O00186 592 aa21.53■■□□□ 1.04
SMPD1-203ENST00000527275 GADL1Q6ZQY3 521 aa21.53■■□□□ 1.04
SMPD1-203ENST00000527275 PROCA1Q8NCQ7 364 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-203ENST00000527275 COA7Q96BR5 231 aa21.53■■□□□ 1.04
SMPD1-203ENST00000527275 MMP1P03956 469 aa21.52■■□□□ 1.04
SMPD1-203ENST00000527275 SNAPC2Q13487 334 aa21.52■■□□□ 1.04
SMPD1-203ENST00000527275 GNL2Q13823 731 aaKnown RBP21.52■■□□□ 1.04
SMPD1-203ENST00000527275 PHF20Q9BVI0 1012 aa21.52■■□□□ 1.04
SMPD1-203ENST00000527275 CATSPERGQ6ZRH7 1159 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 SH3GLB2Q9NR46 395 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 PPP1R9AQ9ULJ8 1098 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 USP17L15C9J2P7 530 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 USP17L13C9JLJ4 530 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 USP17L11C9JVI0 530 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 USP17L18D6R9N7 530 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 USP17L22D6RA61 530 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 USP17L17D6RBQ6 530 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 USP17L19D6RCP7 530 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 USP17L20D6RJB6 530 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 USP17L24Q0WX57 530 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 MOGSQ13724 837 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 RANBP17Q9H2T7 1088 aaKnown RBP21.51■■□□□ 1.03
SMPD1-203ENST00000527275 POLR3EQ9NVU0 708 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 DACT1Q9NYF0 836 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 CLIC4Q9Y696 253 aa21.51■■□□□ 1.03
SMPD1-203ENST00000527275 U2AF2P26368 475 aaKnown RBP eCLIP21.5■■□□□ 1.03
SMPD1-203ENST00000527275 NAPAP54920 295 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 NLRP5P59047 1200 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 COG2Q14746 738 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 SPRYD7Q5W111 196 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 LINC00301Q8NCQ3 95 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 MS4A4AQ96JQ5 239 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 ME1P48163 572 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 ZNF157P51786 506 aaPredicted RBP21.5■■□□□ 1.03
SMPD1-203ENST00000527275 NPY5RQ15761 445 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 CCDC174Q6PII3 467 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 DIS3L2Q8IYB7 885 aaKnown RBP21.5■■□□□ 1.03
SMPD1-203ENST00000527275 AMNQ9BXJ7 453 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 PCDHA1Q9Y5I3 950 aa21.5■■□□□ 1.03
SMPD1-203ENST00000527275 SMCHD1A6NHR9 2005 aa21.49■■□□□ 1.03
SMPD1-203ENST00000527275 BTBD18B2RXH4 712 aa21.49■■□□□ 1.03
SMPD1-203ENST00000527275 hCG_1984214I3L0E3 225 aa21.49■■□□□ 1.03
SMPD1-203ENST00000527275 ZBTB48P10074 688 aaPredicted RBP21.49■■□□□ 1.03
SMPD1-203ENST00000527275 STK38Q15208 465 aa21.49■■□□□ 1.03
SMPD1-203ENST00000527275 FASTKD5Q7L8L6 764 aaKnown RBP21.49■■□□□ 1.03
SMPD1-203ENST00000527275 ZNF713Q8N859 430 aaPredicted RBP21.49■■□□□ 1.03
SMPD1-203ENST00000527275 OXER1Q8TDS5 423 aa21.49■■□□□ 1.03
SMPD1-203ENST00000527275 ATG4CQ96DT6 458 aa21.49■■□□□ 1.03
SMPD1-203ENST00000527275 NUP62CLQ9H1M0 184 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms