RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 LACTBP83111 547 aaPredicted RBP12.54□□□□□ -0.4
NEDD8-205ENST00000527046 SP3Q02447 781 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 PKN1Q16512 942 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 RTN1Q16799 776 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 QRICH1Q2TAL8 776 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
NEDD8-205ENST00000527046 MB21D1Q8N884 522 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 NECAB1Q8N987 351 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 GPRC5AQ8NFJ5 357 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 PIGSQ96S52 555 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 SPZ1Q9BXG8 430 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 GJD2Q9UKL4 321 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
NEDD8-205ENST00000527046 GOLGA8AA7E2F4 631 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 GOLGA8BA8MQT2 603 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 OPLAHO14841 1288 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 PPFIA3O75145 1194 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 FDX1P10109 184 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 STAT3P40763 770 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 METAP2P50579 478 aaKnown RBP eCLIP12.53□□□□□ -0.4
NEDD8-205ENST00000527046 OAZ1P54368 228 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 FGD1P98174 961 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 PPP2R5BQ15173 497 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 NOL8Q76FK4 1167 aaKnown RBP12.53□□□□□ -0.4
NEDD8-205ENST00000527046 CPXCR1Q8N123 301 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 CCDC82Q8N4S0 544 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 CTCFLQ8NI51 663 aaPredicted RBP12.53□□□□□ -0.4
NEDD8-205ENST00000527046 GTF3C2Q8WUA4 911 aaPredicted RBP12.53□□□□□ -0.4
NEDD8-205ENST00000527046 CLEC4DQ8WXI8 215 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 USP6NLQ92738 828 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 TRIM47Q96LD4 638 aa12.53□□□□□ -0.4
NEDD8-205ENST00000527046 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.4
NEDD8-205ENST00000527046 hCG_1642624A0A1W2PR95 340 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 ADAMTS3O15072 1205 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 FKTNO75072 461 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 ZBED4O75132 1171 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 IGHA2P01877 340 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 ICAM1P05362 532 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 FDPSP14324 419 aaKnown RBP12.52□□□□□ -0.41
NEDD8-205ENST00000527046 ERCC3P19447 782 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 KIF5BP33176 963 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 STK3Q13188 491 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 ANKRD1Q15327 319 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.41
NEDD8-205ENST00000527046 MUM1L1Q5H9M0 696 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 TYW1BQ6NUM6 668 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 CCDC174Q6PII3 467 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.52□□□□□ -0.41
NEDD8-205ENST00000527046 SHCBP1Q8NEM2 672 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 CD99L2Q8TCZ2 262 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 TBC1D5Q92609 795 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 LZTS2Q9BRK4 669 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 BEGAINQ9BUH8 593 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
NEDD8-205ENST00000527046 LIMCH1Q9UPQ0 1083 aa12.52□□□□□ -0.41
NEDD8-205ENST00000527046 V9GY48 417 aaPredicted RBP12.52□□□□□ -0.41
NEDD8-205ENST00000527046 PNMA6FA0A0J9YX94 578 aa12.51□□□□□ -0.41
NEDD8-205ENST00000527046 ZBTB5O15062 677 aa12.51□□□□□ -0.41
NEDD8-205ENST00000527046 PRPF3O43395 683 aaKnown RBP12.51□□□□□ -0.41
NEDD8-205ENST00000527046 ECM2O94769 699 aaPredicted RBP12.51□□□□□ -0.41
NEDD8-205ENST00000527046 IFNAR1P17181 557 aa12.51□□□□□ -0.41
NEDD8-205ENST00000527046 PSMC4P43686 418 aa12.51□□□□□ -0.41
NEDD8-205ENST00000527046 CTCFP49711 727 aaPredicted RBP12.51□□□□□ -0.41
NEDD8-205ENST00000527046 GNAQP50148 359 aa12.51□□□□□ -0.41
NEDD8-205ENST00000527046 MORN1Q5T089 497 aa12.51□□□□□ -0.41
NEDD8-205ENST00000527046 SNRNP48Q6IEG0 339 aaKnown RBP12.51□□□□□ -0.41
NEDD8-205ENST00000527046 PHKBQ93100 1093 aa12.51□□□□□ -0.41
NEDD8-205ENST00000527046 TEX13BQ9BXU2 312 aa12.51□□□□□ -0.41
NEDD8-205ENST00000527046 GABRQQ9UN88 632 aa12.51□□□□□ -0.41
NEDD8-205ENST00000527046 MYH6P13533 1939 aa12.5□□□□□ -0.41
NEDD8-205ENST00000527046 IKQ13123 557 aaPredicted RBP12.5□□□□□ -0.41
NEDD8-205ENST00000527046 GPR142Q7Z601 462 aa12.5□□□□□ -0.41
NEDD8-205ENST00000527046 NSUN7Q8NE18 718 aaKnown RBP12.5□□□□□ -0.41
NEDD8-205ENST00000527046 IL27Q8NEV9 243 aa12.5□□□□□ -0.41
NEDD8-205ENST00000527046 PIBF1Q8WXW3 757 aa12.5□□□□□ -0.41
NEDD8-205ENST00000527046 GTF3C6Q969F1 213 aa12.5□□□□□ -0.41
NEDD8-205ENST00000527046 COA7Q96BR5 231 aa12.5□□□□□ -0.41
NEDD8-205ENST00000527046 TMX3Q96JJ7 454 aa12.5□□□□□ -0.41
NEDD8-205ENST00000527046 FGD4Q96M96 766 aa12.5□□□□□ -0.41
NEDD8-205ENST00000527046 SLKQ9H2G2 1235 aaPredicted RBP12.5□□□□□ -0.41
NEDD8-205ENST00000527046 ISY1Q9ULR0 285 aaKnown RBP12.5□□□□□ -0.41
NEDD8-205ENST00000527046 NAP1L2Q9ULW6 460 aaPredicted RBP12.5□□□□□ -0.41
NEDD8-205ENST00000527046 LCTP09848 1927 aa12.5□□□□□ -0.41
NEDD8-205ENST00000527046 ASTN1O14525 1302 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 DNAJC25-GNG10A0A024R161 153 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 NFIBO00712 420 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 COBLO75128 1261 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 SLC25A27O95847 323 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 PTPREP23469 700 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 GHRHRQ02643 423 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 PLS1Q14651 629 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 HOMER1Q86YM7 354 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 SMARCC2Q8TAQ2 1214 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 SNX21Q969T3 373 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
NEDD8-205ENST00000527046 TRERF1Q96PN7 1200 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 PURBQ96QR8 312 aaKnown RBP12.49□□□□□ -0.41
NEDD8-205ENST00000527046 MROH8Q9H579 483 aa12.49□□□□□ -0.41
NEDD8-205ENST00000527046 CCDC196A0A1B0GTZ2 297 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms