RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 PRNPP04156 253 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 CLCN7P51798 805 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 DHX8Q14562 1220 aaKnown RBP6.31□□□□□ -1.4
CTR9-203ENST00000526874 LRRC41Q15345 812 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 SYCP2LQ5T4T6 812 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 LRP10Q7Z4F1 713 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 TP53INP2Q8IXH6 220 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 CCDC144CPQ8IYA2 1237 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 DUSP15Q9H1R2 295 aaPredicted RBP6.31□□□□□ -1.4
CTR9-203ENST00000526874 PAK6Q9NQU5 681 aaPredicted RBP6.31□□□□□ -1.4
CTR9-203ENST00000526874 TMEM260Q9NX78 707 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 SUCOQ9UBS9 1254 aaKnown RBP6.31□□□□□ -1.4
CTR9-203ENST00000526874 SFMBT1Q9UHJ3 866 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 KCNH3Q9ULD8 1083 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 STRIP2Q9ULQ0 834 aa6.31□□□□□ -1.4
CTR9-203ENST00000526874 B2RBV5 119 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 TSPAN6O43657 245 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 TPP2P29144 1249 aaPredicted RBP6.3□□□□□ -1.4
CTR9-203ENST00000526874 CCNFP41002 786 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 RNF4P78317 190 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 EXOSC10Q01780 885 aaKnown RBP6.3□□□□□ -1.4
CTR9-203ENST00000526874 NFE2Q16621 373 aaPredicted RBP6.3□□□□□ -1.4
CTR9-203ENST00000526874 NBPF9Q3BBW0 867 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 AXDND1Q5T1B0 1012 aaPredicted RBP6.3□□□□□ -1.4
CTR9-203ENST00000526874 INTS3Q68E01 1043 aaKnown RBP6.3□□□□□ -1.4
CTR9-203ENST00000526874 C16orf86Q6ZW13 317 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 TAB3Q8N5C8 712 aaPredicted RBP6.3□□□□□ -1.4
CTR9-203ENST00000526874 CELF2-AS1Q8N7Q2 184 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 RELTQ969Z4 430 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 COX4I2Q96KJ9 171 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 FBXL18Q96ME1 805 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 FEZ1Q99689 392 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 PRDM14Q9GZV8 571 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 GFOD1Q9NXC2 390 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 FBXL21Q9UKT6 434 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 VAV3Q9UKW4 847 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 MSRB2Q9Y3D2 182 aa6.3□□□□□ -1.4
CTR9-203ENST00000526874 KIF3BO15066 747 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 BDNFP23560 247 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 PMS1P54277 932 aaKnown RBP6.29□□□□□ -1.4
CTR9-203ENST00000526874 GP2P55259 537 aaKnown RBP6.29□□□□□ -1.4
CTR9-203ENST00000526874 CLEC16AQ2KHT3 1053 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 LARP1BQ659C4 914 aaKnown RBP6.29□□□□□ -1.4
CTR9-203ENST00000526874 KRBA2Q6ZNG9 492 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 KRT26Q7Z3Y9 468 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 NBPF11Q86T75 865 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 OR6P1Q8NGX9 317 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 PIWIL2Q8TC59 973 aaKnown RBP6.29□□□□□ -1.4
CTR9-203ENST00000526874 MISP3Q96FF7 219 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 SCYL1Q96KG9 808 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 CARS2Q9HA77 564 aaKnown RBP6.29□□□□□ -1.4
CTR9-203ENST00000526874 ARNT2Q9HBZ2 717 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 ATP8A1Q9Y2Q0 1164 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 SNX11Q9Y5W9 270 aa6.29□□□□□ -1.4
CTR9-203ENST00000526874 OAS3Q9Y6K5 1087 aaKnown RBP6.29□□□□□ -1.4
CTR9-203ENST00000526874 SHOXO15266 292 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 KCNQ2O43526 872 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 NMIQ13287 307 aaPredicted RBP6.28□□□□□ -1.4
CTR9-203ENST00000526874 SAFB2Q14151 953 aaKnown RBP eCLIP6.28□□□□□ -1.4
CTR9-203ENST00000526874 PLCL1Q15111 1095 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 GNPTABQ3T906 1256 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 CREG2Q8IUH2 290 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 ABI1Q8IZP0 508 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 STK11IPQ8N1F8 1099 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 ASB11Q8WXH4 323 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 KLHL6Q8WZ60 621 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 ARPC5LQ9BPX5 153 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 ACTR10Q9NZ32 417 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 PRKAG3Q9UGI9 489 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 DUSP13Q9UII6 198 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 ADAMTS6Q9UKP5 1117 aa6.28□□□□□ -1.4
CTR9-203ENST00000526874 ZNF214Q9UL59 606 aaPredicted RBP6.28□□□□□ -1.4
CTR9-203ENST00000526874 ALDH1L1O75891 902 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 PRAMEF1O95521 474 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 SRFP11831 508 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 ZP2Q05996 745 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 AUHQ13825 339 aaKnown RBP6.27□□□□□ -1.41
CTR9-203ENST00000526874 TTF1Q15361 905 aaPredicted RBP6.27□□□□□ -1.41
CTR9-203ENST00000526874 DALRD3Q5D0E6 543 aaKnown RBP6.27□□□□□ -1.41
CTR9-203ENST00000526874 ANGEL2Q5VTE6 544 aaKnown RBP6.27□□□□□ -1.41
CTR9-203ENST00000526874 KIAA1211LQ6NV74 962 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 VHLLQ6RSH7 139 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 C19orf47Q8N9M1 422 aaKnown RBP6.27□□□□□ -1.41
CTR9-203ENST00000526874 BRF1Q92994 677 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 DHRS1Q96LJ7 313 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 FGD4Q96M96 766 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 MTA3Q9BTC8 594 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 GPR62Q9BZJ7 368 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 CCDC113Q9H0I3 377 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 ASCC2Q9H1I8 757 aaPredicted RBP6.27□□□□□ -1.41
CTR9-203ENST00000526874 ST7Q9NRC1 585 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 PCDHB12Q9Y5F1 795 aa6.27□□□□□ -1.41
CTR9-203ENST00000526874 PLIN1O60240 522 aa6.26□□□□□ -1.41
CTR9-203ENST00000526874 CAND2O75155 1236 aa6.26□□□□□ -1.41
CTR9-203ENST00000526874 ESR1P03372 595 aa6.26□□□□□ -1.41
CTR9-203ENST00000526874 PTMSP20962 102 aa6.26□□□□□ -1.41
CTR9-203ENST00000526874 LTKP29376 864 aa6.26□□□□□ -1.41
CTR9-203ENST00000526874 CASP7P55210 303 aa6.26□□□□□ -1.41
CTR9-203ENST00000526874 OS9Q13438 667 aaPredicted RBP6.26□□□□□ -1.41
CTR9-203ENST00000526874 C21orf62-AS1Q17RA5 79 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms