RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PAPPA2Q9BXP8 1791 aa23.45■■□□□ 1.34
SMCO4-203ENST00000526869 WDR46O15213 610 aaKnown RBP23.45■■□□□ 1.34
SMCO4-203ENST00000526869 CMA1P23946 247 aa23.45■■□□□ 1.34
SMCO4-203ENST00000526869 USP14P54578 494 aa23.45■■□□□ 1.34
SMCO4-203ENST00000526869 IKQ13123 557 aaPredicted RBP23.45■■□□□ 1.34
SMCO4-203ENST00000526869 FAM83BQ5T0W9 1011 aa23.45■■□□□ 1.34
SMCO4-203ENST00000526869 SPICE1Q8N0Z3 855 aa23.45■■□□□ 1.34
SMCO4-203ENST00000526869 REXO1Q8N1G1 1221 aaKnown RBP23.45■■□□□ 1.34
SMCO4-203ENST00000526869 COA7Q96BR5 231 aa23.45■■□□□ 1.34
SMCO4-203ENST00000526869 GLIS2Q9BZE0 524 aaPredicted RBP23.45■■□□□ 1.34
SMCO4-203ENST00000526869 PICK1Q9NRD5 415 aa23.45■■□□□ 1.34
SMCO4-203ENST00000526869 PRR12Q9ULL5 1215 aa23.45■■□□□ 1.34
SMCO4-203ENST00000526869 POLR2AP24928 1970 aaKnown RBP23.44■■□□□ 1.34
SMCO4-203ENST00000526869 ADAMTS3O15072 1205 aa23.44■■□□□ 1.34
SMCO4-203ENST00000526869 FAM160A1Q05DH4 1040 aa23.44■■□□□ 1.34
SMCO4-203ENST00000526869 KRI1Q8N9T8 703 aaKnown RBP23.44■■□□□ 1.34
SMCO4-203ENST00000526869 FSIP1Q8NA03 581 aa23.44■■□□□ 1.34
SMCO4-203ENST00000526869 AMNQ9BXJ7 453 aa23.44■■□□□ 1.34
SMCO4-203ENST00000526869 FAM237AA0A1B0GTK4 181 aa23.43■■□□□ 1.34
SMCO4-203ENST00000526869 PTPREP23469 700 aa23.43■■□□□ 1.34
SMCO4-203ENST00000526869 MRPL12P52815 198 aaKnown RBP23.43■■□□□ 1.34
SMCO4-203ENST00000526869 ORC2Q13416 577 aaPredicted RBP23.43■■□□□ 1.34
SMCO4-203ENST00000526869 NOM1Q5C9Z4 860 aaKnown RBP23.43■■□□□ 1.34
SMCO4-203ENST00000526869 PRAMEF18Q5VWM3 479 aa23.43■■□□□ 1.34
SMCO4-203ENST00000526869 MCTP2Q6DN12 878 aa23.43■■□□□ 1.34
SMCO4-203ENST00000526869 FBXO11Q86XK2 927 aa23.43■■□□□ 1.34
SMCO4-203ENST00000526869 ZNF579Q8NAF0 562 aaKnown RBP23.43■■□□□ 1.34
SMCO4-203ENST00000526869 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.43■■□□□ 1.34
SMCO4-203ENST00000526869 CUL5Q93034 780 aa23.43■■□□□ 1.34
SMCO4-203ENST00000526869 DACT1Q9NYF0 836 aa23.43■■□□□ 1.34
SMCO4-203ENST00000526869 FBXO2Q9UK22 296 aaPredicted RBP23.43■■□□□ 1.34
SMCO4-203ENST00000526869 PTPRAP18433 802 aa23.42■■□□□ 1.34
SMCO4-203ENST00000526869 MARCKSP29966 332 aaPredicted RBP23.42■■□□□ 1.34
SMCO4-203ENST00000526869 NONOQ15233 471 aaKnown RBP eCLIP23.42■■□□□ 1.34
SMCO4-203ENST00000526869 KRT26Q7Z3Y9 468 aa23.42■■□□□ 1.34
SMCO4-203ENST00000526869 CCDC84Q86UT8 332 aaPredicted RBP23.42■■□□□ 1.34
SMCO4-203ENST00000526869 ENGASEQ8NFI3 743 aa23.42■■□□□ 1.34
SMCO4-203ENST00000526869 RASGRP4Q8TDF6 673 aa23.42■■□□□ 1.34
SMCO4-203ENST00000526869 NUP62CLQ9H1M0 184 aa23.42■■□□□ 1.34
SMCO4-203ENST00000526869 GOLPH3LQ9H4A5 285 aa23.42■■□□□ 1.34
SMCO4-203ENST00000526869 CLSTN2Q9H4D0 955 aa23.42■■□□□ 1.34
SMCO4-203ENST00000526869 TAF1DQ9H5J8 278 aaPredicted RBP23.42■■□□□ 1.34
SMCO4-203ENST00000526869 SRPRBQ9Y5M8 271 aaKnown RBP23.42■■□□□ 1.34
SMCO4-203ENST00000526869 PHIPQ8WWQ0 1821 aa23.41■■□□□ 1.34
SMCO4-203ENST00000526869 USP2O75604 605 aaPredicted RBP23.41■■□□□ 1.34
SMCO4-203ENST00000526869 ATP2C1P98194 919 aaPredicted RBP23.41■■□□□ 1.34
SMCO4-203ENST00000526869 PNMA8AQ86V59 439 aaPredicted RBP23.41■■□□□ 1.34
SMCO4-203ENST00000526869 ZNF280CQ8ND82 737 aa23.41■■□□□ 1.34
SMCO4-203ENST00000526869 FERMT2Q96AC1 680 aa23.41■■□□□ 1.34
SMCO4-203ENST00000526869 RANBP17Q9H2T7 1088 aaKnown RBP23.41■■□□□ 1.34
SMCO4-203ENST00000526869 PCDHA1Q9Y5I3 950 aa23.41■■□□□ 1.34
SMCO4-203ENST00000526869 FSD2A1L4K1 749 aa23.4■■□□□ 1.34
SMCO4-203ENST00000526869 ADM5C9JUS6 153 aa23.4■■□□□ 1.34
SMCO4-203ENST00000526869 NR1I2O75469 434 aa23.4■■□□□ 1.34
SMCO4-203ENST00000526869 ATP2B1P20020 1258 aa23.4■■□□□ 1.34
SMCO4-203ENST00000526869 CLK2P49760 499 aaKnown RBP23.4■■□□□ 1.34
SMCO4-203ENST00000526869 ZYXQ15942 572 aaKnown RBP23.4■■□□□ 1.34
SMCO4-203ENST00000526869 TPRNQ4KMQ1 711 aa23.4■■□□□ 1.34
SMCO4-203ENST00000526869 RESP18Q5W5W9 173 aa23.4■■□□□ 1.34
SMCO4-203ENST00000526869 LRSAM1Q6UWE0 723 aa23.4■■□□□ 1.34
SMCO4-203ENST00000526869 ZKSCAN4Q969J2 545 aaPredicted RBP23.4■■□□□ 1.34
SMCO4-203ENST00000526869 C12orf42Q96LP6 360 aa23.4■■□□□ 1.34
SMCO4-203ENST00000526869 C19orf81C9J6K1 198 aa23.39■■□□□ 1.33
SMCO4-203ENST00000526869 PPP1R12BO60237 982 aaPredicted RBP23.39■■□□□ 1.33
SMCO4-203ENST00000526869 BACE1P56817 501 aa23.39■■□□□ 1.33
SMCO4-203ENST00000526869 SNW1Q13573 536 aaKnown RBP23.39■■□□□ 1.33
SMCO4-203ENST00000526869 FMR1NBQ8N0W7 255 aaPredicted RBP23.39■■□□□ 1.33
SMCO4-203ENST00000526869 PSTPIP2Q9H939 334 aa23.39■■□□□ 1.33
SMCO4-203ENST00000526869 SYCE3A1L190 88 aa23.38■■□□□ 1.33
SMCO4-203ENST00000526869 LAD1O00515 517 aa23.38■■□□□ 1.33
SMCO4-203ENST00000526869 WNT7AO00755 349 aa23.38■■□□□ 1.33
SMCO4-203ENST00000526869 CTAGE5O15320 804 aa23.38■■□□□ 1.33
SMCO4-203ENST00000526869 NF2P35240 595 aa23.38■■□□□ 1.33
SMCO4-203ENST00000526869 MAP3K9P80192 1104 aa23.38■■□□□ 1.33
SMCO4-203ENST00000526869 ZNF174Q15697 407 aa23.38■■□□□ 1.33
SMCO4-203ENST00000526869 ARL6IP4Q66PJ3 421 aaKnown RBP23.38■■□□□ 1.33
SMCO4-203ENST00000526869 RBM43Q6ZSC3 357 aaKnown RBP23.38■■□□□ 1.33
SMCO4-203ENST00000526869 NEK8Q86SG6 692 aa23.38■■□□□ 1.33
SMCO4-203ENST00000526869 HPSEQ9Y251 543 aa23.38■■□□□ 1.33
SMCO4-203ENST00000526869 GOLGA6L3A6NEY3 463 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 KINO60870 393 aaKnown RBP23.37■■□□□ 1.33
SMCO4-203ENST00000526869 SPP2Q13103 211 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 AP3B2Q13367 1082 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 MTMR2Q13614 643 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 INF2Q27J81 1249 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 SHC4Q6S5L8 630 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 PRPF38AQ8NAV1 312 aaKnown RBP23.37■■□□□ 1.33
SMCO4-203ENST00000526869 CDCA5Q96FF9 252 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 SLF1Q9BQI6 1058 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 EMILIN3Q9NT22 766 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 BIN2Q9UBW5 565 aaPredicted RBP23.37■■□□□ 1.33
SMCO4-203ENST00000526869 PNMA2Q9UL42 364 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 OTOFQ9HC10 1997 aa23.37■■□□□ 1.33
SMCO4-203ENST00000526869 POTECB2RU33 542 aa23.36■■□□□ 1.33
SMCO4-203ENST00000526869 FDX1P10109 184 aa23.36■■□□□ 1.33
SMCO4-203ENST00000526869 PFKFB1P16118 471 aa23.36■■□□□ 1.33
SMCO4-203ENST00000526869 VCAM1P19320 739 aa23.36■■□□□ 1.33
SMCO4-203ENST00000526869 IREB2P48200 963 aaKnown RBP23.36■■□□□ 1.33
SMCO4-203ENST00000526869 NDUFA8P51970 172 aa23.36■■□□□ 1.33
SMCO4-203ENST00000526869 PTGDRQ13258 359 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms