RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 PLIN4Q96Q06 1357 aa22.04■■□□□ 1.12
CDC27-203ENST00000526866 ASGR1P07306 291 aa22.03■■□□□ 1.12
CDC27-203ENST00000526866 BMP3P12645 472 aa22.03■■□□□ 1.12
CDC27-203ENST00000526866 OAZ1P54368 228 aa22.03■■□□□ 1.12
CDC27-203ENST00000526866 ARMCX2Q7L311 632 aa22.03■■□□□ 1.12
CDC27-203ENST00000526866 NEDD1Q8NHV4 660 aa22.03■■□□□ 1.12
CDC27-203ENST00000526866 TBX21Q9UL17 535 aa22.03■■□□□ 1.12
CDC27-203ENST00000526866 ELP1O95163 1332 aa22.02■■□□□ 1.12
CDC27-203ENST00000526866 TMEM265A0A087WTH1 108 aa22.02■■□□□ 1.12
CDC27-203ENST00000526866 TIMP1P01033 207 aa22.02■■□□□ 1.12
CDC27-203ENST00000526866 TSPY3P0CV98 308 aa22.02■■□□□ 1.12
CDC27-203ENST00000526866 TSPY8P0CW00 308 aa22.02■■□□□ 1.12
CDC27-203ENST00000526866 FOSL2P15408 326 aa22.02■■□□□ 1.12
CDC27-203ENST00000526866 GJA9P57773 515 aa22.02■■□□□ 1.12
CDC27-203ENST00000526866 PCSK9Q8NBP7 692 aaKnown RBP22.02■■□□□ 1.12
CDC27-203ENST00000526866 UPF3AQ9H1J1 476 aaKnown RBP22.02■■□□□ 1.12
CDC27-203ENST00000526866 HOMER2Q9NSB8 354 aa22.02■■□□□ 1.12
CDC27-203ENST00000526866 VCANP13611 3396 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 PRUNE2Q8WUY3 3088 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 TMEM232C9JQI7 657 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 CDK7P50613 346 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 CNTN2Q02246 1040 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 PDE4BQ07343 736 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 CCDC144CPQ8IYA2 1237 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 NACAP1Q9BZK3 213 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 KATNBL1Q9H079 304 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 SPC25Q9HBM1 224 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 MROH7Q68CQ1 1323 aa22.01■■□□□ 1.11
CDC27-203ENST00000526866 HSFX4A0A1B0GTS1 333 aaPredicted RBP22■■□□□ 1.11
CDC27-203ENST00000526866 HSFX3A0A1B0GWH4 333 aaPredicted RBP22■■□□□ 1.11
CDC27-203ENST00000526866 TFAP4Q01664 338 aa22■■□□□ 1.11
CDC27-203ENST00000526866 LRRFIP1Q32MZ4 808 aaKnown RBP22■■□□□ 1.11
CDC27-203ENST00000526866 VTI1AQ96AJ9 217 aa22■■□□□ 1.11
CDC27-203ENST00000526866 CHMP4CQ96CF2 233 aa22■■□□□ 1.11
CDC27-203ENST00000526866 BUD13Q9BRD0 619 aaKnown RBP eCLIP22■■□□□ 1.112e-7■■□□□ 12.1
CDC27-203ENST00000526866 ISY1Q9ULR0 285 aaKnown RBP22■■□□□ 1.11
CDC27-203ENST00000526866 FDX1P10109 184 aa21.99■■□□□ 1.11
CDC27-203ENST00000526866 PPARAQ07869 468 aa21.99■■□□□ 1.11
CDC27-203ENST00000526866 GNASQ5JWF2 1037 aa21.99■■□□□ 1.11
CDC27-203ENST00000526866 MFSD5Q6N075 450 aa21.99■■□□□ 1.11
CDC27-203ENST00000526866 FAM133AQ8N9E0 248 aa21.99■■□□□ 1.11
CDC27-203ENST00000526866 PI4K2BQ8TCG2 481 aa21.99■■□□□ 1.11
CDC27-203ENST00000526866 NAPBQ9H115 298 aa21.99■■□□□ 1.11
CDC27-203ENST00000526866 ACAD9Q9H845 621 aa21.99■■□□□ 1.11
CDC27-203ENST00000526866 TTC41PQ6P2S7 1318 aa21.99■■□□□ 1.11
CDC27-203ENST00000526866 A0A0U1RQG5 324 aaPredicted RBP21.98■■□□□ 1.11
CDC27-203ENST00000526866 ARVCFO00192 962 aa21.98■■□□□ 1.11
CDC27-203ENST00000526866 CTAGE5O15320 804 aa21.98■■□□□ 1.11
CDC27-203ENST00000526866 DNAJB2P25686 324 aa21.98■■□□□ 1.11
CDC27-203ENST00000526866 STAT2P52630 851 aa21.98■■□□□ 1.11
CDC27-203ENST00000526866 GRIN2CQ14957 1233 aa21.98■■□□□ 1.11
CDC27-203ENST00000526866 OTUD7AQ8TE49 926 aaPredicted RBP21.98■■□□□ 1.11
CDC27-203ENST00000526866 AGBL1Q96MI9 1066 aa21.98■■□□□ 1.11
CDC27-203ENST00000526866 A1CFQ9NQ94 594 aaKnown RBP21.98■■□□□ 1.11
CDC27-203ENST00000526866 ZNF536O15090 1300 aa21.98■■□□□ 1.11
CDC27-203ENST00000526866 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.97■■□□□ 1.11
CDC27-203ENST00000526866 SLC3A2P08195 630 aaKnown RBP21.97■■□□□ 1.11
CDC27-203ENST00000526866 ZMYM1Q5SVZ6 1142 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 C16orf59Q7L2K0 433 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 FAM160B2Q86V87 743 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 STAG1Q8WVM7 1258 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 GMCL1Q96IK5 515 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 FSD1Q9BTV5 496 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 RNF146Q9NTX7 359 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 SOWAHBA6NEL2 793 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 ERC2O15083 957 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 MCCP23508 829 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 SLC1A4P43007 532 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 BEX3Q00994 111 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 IKQ13123 557 aaPredicted RBP21.97■■□□□ 1.11
CDC27-203ENST00000526866 PPIGQ13427 754 aaKnown RBP eCLIP21.97■■□□□ 1.116e-8■■■□□ 16.4
CDC27-203ENST00000526866 TMEM240Q5SV17 173 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 FAM126BQ8IXS8 530 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 CHURC1Q8WUH1 139 aa21.97■■□□□ 1.11
CDC27-203ENST00000526866 ASTN1O14525 1302 aa21.96■■□□□ 1.11
CDC27-203ENST00000526866 LRRC37A2A6NM11 1700 aa21.96■■□□□ 1.11
CDC27-203ENST00000526866 CSF2RAP15509 400 aa21.96■■□□□ 1.11
CDC27-203ENST00000526866 NKX3-2P78367 333 aa21.96■■□□□ 1.11
CDC27-203ENST00000526866 TNFAIP2Q03169 654 aa21.96■■□□□ 1.11
CDC27-203ENST00000526866 PPP1R12CQ9BZL4 782 aa21.96■■□□□ 1.11
CDC27-203ENST00000526866 SPTBN5Q9NRC6 3674 aaKnown RBP21.95■■□□□ 1.1
CDC27-203ENST00000526866 FOXP2O15409 715 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 ALAS1P13196 640 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 SNAP25P60880 206 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 KCTD1Q719H9 257 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 RASGRP2Q7LDG7 609 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 TIFAQ96CG3 184 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 TRERF1Q96PN7 1200 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 ZNF576Q9H609 170 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 INCENPQ9NQS7 918 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 STX8Q9UNK0 236 aa21.95■■□□□ 1.1
CDC27-203ENST00000526866 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.95■■□□□ 1.1
CDC27-203ENST00000526866 DDX49Q9Y6V7 483 aaKnown RBP21.95■■□□□ 1.1
CDC27-203ENST00000526866 ASB14A6NK59 587 aa21.94■■□□□ 1.1
CDC27-203ENST00000526866 TLR3O15455 904 aaKnown RBP21.94■■□□□ 1.1
CDC27-203ENST00000526866 ACRP10323 421 aa21.94■■□□□ 1.1
CDC27-203ENST00000526866 CTDSPL2Q05D32 466 aa21.94■■□□□ 1.1
CDC27-203ENST00000526866 TKFCQ3LXA3 575 aa21.94■■□□□ 1.1
CDC27-203ENST00000526866 CCDC174Q6PII3 467 aa21.94■■□□□ 1.1
CDC27-203ENST00000526866 CCDC129Q6ZRS4 1044 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms