RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 RIPK3Q9Y572 518 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 FAM186AA6NE01 2351 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 MYH8P13535 1937 aa16.47■□□□□ 0.23
SSRP1-203ENST00000526696 DCHS1Q96JQ0 3298 aa16.47■□□□□ 0.23
SSRP1-203ENST00000526696 LCHNA4D1U4 455 aa16.47■□□□□ 0.23
SSRP1-203ENST00000526696 GRXCR2A6NFK2 248 aa16.47■□□□□ 0.23
SSRP1-203ENST00000526696 WDR46O15213 610 aaKnown RBP16.47■□□□□ 0.23
SSRP1-203ENST00000526696 PSMC6P62333 389 aa16.47■□□□□ 0.23
SSRP1-203ENST00000526696 PTCRAQ6ISU1 281 aaPredicted RBP16.47■□□□□ 0.23
SSRP1-203ENST00000526696 HERC6Q8IVU3 1022 aa16.47■□□□□ 0.23
SSRP1-203ENST00000526696 SLC9A7Q96T83 725 aa16.47■□□□□ 0.23
SSRP1-203ENST00000526696 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
SSRP1-203ENST00000526696 LMCD1Q9NZU5 365 aa16.47■□□□□ 0.23
SSRP1-203ENST00000526696 PFKMP08237 780 aa16.46■□□□□ 0.23
SSRP1-203ENST00000526696 MTX1Q13505 466 aa16.46■□□□□ 0.23
SSRP1-203ENST00000526696 TTC39AQ5SRH9 613 aa16.46■□□□□ 0.23
SSRP1-203ENST00000526696 ZNF467Q7Z7K2 595 aaPredicted RBP16.46■□□□□ 0.23
SSRP1-203ENST00000526696 PHOSPHO2Q8TCD6 241 aa16.46■□□□□ 0.23
SSRP1-203ENST00000526696 ABHD16BQ9H3Z7 469 aa16.46■□□□□ 0.23
SSRP1-203ENST00000526696 PPP1R9AQ9ULJ8 1098 aa16.46■□□□□ 0.23
SSRP1-203ENST00000526696 MYO15AQ9UKN7 3530 aa16.46■□□□□ 0.23
SSRP1-203ENST00000526696 CYP2C9P11712 490 aa16.45■□□□□ 0.22
SSRP1-203ENST00000526696 TMEM179Q6ZVK1 233 aa16.45■□□□□ 0.22
SSRP1-203ENST00000526696 AKR1B1P15121 316 aa16.44■□□□□ 0.22
SSRP1-203ENST00000526696 COPB2P35606 906 aa16.44■□□□□ 0.22
SSRP1-203ENST00000526696 FOXK2Q01167 660 aa16.44■□□□□ 0.22
SSRP1-203ENST00000526696 IER5LQ5T953 404 aa16.44■□□□□ 0.22
SSRP1-203ENST00000526696 ARMCX2Q7L311 632 aa16.44■□□□□ 0.22
SSRP1-203ENST00000526696 DDX11Q96FC9 970 aa16.44■□□□□ 0.22
SSRP1-203ENST00000526696 RIOK1Q9BRS2 568 aaKnown RBP16.44■□□□□ 0.22
SSRP1-203ENST00000526696 SUGCTQ9HAC7 445 aa16.44■□□□□ 0.22
SSRP1-203ENST00000526696 TRMT13Q9NUP7 481 aaKnown RBP16.44■□□□□ 0.22
SSRP1-203ENST00000526696 GNEQ9Y223 722 aaKnown RBP16.44■□□□□ 0.22
SSRP1-203ENST00000526696 TRIP12Q14669 1992 aaPredicted RBP16.44■□□□□ 0.22
SSRP1-203ENST00000526696 CABYRO75952 493 aa16.43■□□□□ 0.22
SSRP1-203ENST00000526696 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
SSRP1-203ENST00000526696 CYP2D6P10635 497 aa16.43■□□□□ 0.22
SSRP1-203ENST00000526696 ICA1Q05084 483 aa16.43■□□□□ 0.22
SSRP1-203ENST00000526696 TMCO2Q7Z6W1 182 aaPredicted RBP16.43■□□□□ 0.22
SSRP1-203ENST00000526696 MAGEB6Q8N7X4 407 aa16.43■□□□□ 0.22
SSRP1-203ENST00000526696 ALDH8A1Q9H2A2 487 aaPredicted RBP16.43■□□□□ 0.22
SSRP1-203ENST00000526696 ZNF536O15090 1300 aa16.43■□□□□ 0.22
SSRP1-203ENST00000526696 SIP14410 1827 aa16.42■□□□□ 0.22
SSRP1-203ENST00000526696 TANC1Q9C0D5 1861 aa16.42■□□□□ 0.22
SSRP1-203ENST00000526696 RBAK-RBAKDNI3L0D1 243 aa16.42■□□□□ 0.22
SSRP1-203ENST00000526696 IGSF3O75054 1194 aa16.42■□□□□ 0.22
SSRP1-203ENST00000526696 IDH1O75874 414 aaKnown RBP16.42■□□□□ 0.22
SSRP1-203ENST00000526696 ZP2Q05996 745 aa16.42■□□□□ 0.22
SSRP1-203ENST00000526696 FSCN1Q16658 493 aaKnown RBP16.42■□□□□ 0.22
SSRP1-203ENST00000526696 TMEM63BQ5T3F8 832 aa16.42■□□□□ 0.22
SSRP1-203ENST00000526696 CCDC144CPQ8IYA2 1237 aa16.42■□□□□ 0.22
SSRP1-203ENST00000526696 NEK9Q8TD19 979 aa16.42■□□□□ 0.22
SSRP1-203ENST00000526696 ARHGEF10LQ9HCE6 1279 aa16.42■□□□□ 0.22
SSRP1-203ENST00000526696 C19orf67A6NJJ6 358 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 TNFAIP2Q03169 654 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 TCF15Q12870 199 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 TNNI3KQ59H18 835 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 SNRNP48Q6IEG0 339 aaKnown RBP16.41■□□□□ 0.22
SSRP1-203ENST00000526696 TLK2Q86UE8 772 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 DYNLL2Q96FJ2 89 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 ZNF512BQ96KM6 892 aaPredicted RBP16.41■□□□□ 0.22
SSRP1-203ENST00000526696 MFSD14AQ96MC6 490 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 TEX13BQ9BXU2 312 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 MTUS1Q9ULD2 1270 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 FPGT-TNNI3KV9GXZ4 949 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 CACNA1GO43497 2377 aa16.41■□□□□ 0.22
SSRP1-203ENST00000526696 DMDP11532 3685 aa16.4■□□□□ 0.22
SSRP1-203ENST00000526696 PNMA6EA0A0J9YXQ4 647 aa16.4■□□□□ 0.22
SSRP1-203ENST00000526696 KIF28PB7ZC32 967 aa16.4■□□□□ 0.22
SSRP1-203ENST00000526696 H3BQ06 376 aaPredicted RBP16.4■□□□□ 0.22
SSRP1-203ENST00000526696 ACTN1P12814 892 aa16.4■□□□□ 0.22
SSRP1-203ENST00000526696 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.4■□□□□ 0.22
SSRP1-203ENST00000526696 CERS3Q8IU89 383 aa16.4■□□□□ 0.22
SSRP1-203ENST00000526696 SEZ6LQ9BYH1 1024 aa16.4■□□□□ 0.22
SSRP1-203ENST00000526696 ANTXR1Q9H6X2 564 aa16.4■□□□□ 0.22
SSRP1-203ENST00000526696 MCM9Q9NXL9 1143 aa16.4■□□□□ 0.22
SSRP1-203ENST00000526696 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
SSRP1-203ENST00000526696 DDX49Q9Y6V7 483 aaKnown RBP16.4■□□□□ 0.22
SSRP1-203ENST00000526696 DYNC1LI2O43237 492 aaPredicted RBP16.39■□□□□ 0.21
SSRP1-203ENST00000526696 EEF2P13639 858 aaKnown RBP16.39■□□□□ 0.21
SSRP1-203ENST00000526696 SMPD1P17405 629 aa16.39■□□□□ 0.21
SSRP1-203ENST00000526696 SH2D4AQ9H788 454 aa16.39■□□□□ 0.21
SSRP1-203ENST00000526696 ALG13Q9NP73 1137 aaKnown RBP16.39■□□□□ 0.21
SSRP1-203ENST00000526696 GVINP1Q7Z2Y8 2422 aa16.39■□□□□ 0.21
SSRP1-203ENST00000526696 TNKSO95271 1327 aa16.39■□□□□ 0.21
SSRP1-203ENST00000526696 SCN10AQ9Y5Y9 1956 aa16.38■□□□□ 0.21
SSRP1-203ENST00000526696 GFRA3O60609 400 aa16.38■□□□□ 0.21
SSRP1-203ENST00000526696 IQCF3P0C7M6 154 aa16.38■□□□□ 0.21
SSRP1-203ENST00000526696 IRS1P35568 1242 aa16.38■□□□□ 0.21
SSRP1-203ENST00000526696 PTPN5P54829 565 aa16.38■□□□□ 0.21
SSRP1-203ENST00000526696 ERVK-21P61565 698 aa16.38■□□□□ 0.21
SSRP1-203ENST00000526696 CNTN2Q02246 1040 aa16.38■□□□□ 0.21
SSRP1-203ENST00000526696 G3BP1Q13283 466 aaKnown RBP eCLIP16.38■□□□□ 0.219e-9■□□□□ 9.9
SSRP1-203ENST00000526696 NOL8Q76FK4 1167 aaKnown RBP16.38■□□□□ 0.21
SSRP1-203ENST00000526696 NUP88Q99567 741 aaPredicted RBP16.38■□□□□ 0.21
SSRP1-203ENST00000526696 GPR108Q9NPR9 543 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms