RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 MOXD2PA6NHM9 499 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 RANBP6O60518 1105 aaKnown RBP13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 ADAMTS4O75173 837 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 FGRP09769 529 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 MCCP23508 829 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 ACLYP53396 1101 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 TLE2Q04725 743 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 CTDSPL2Q05D32 466 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 ACVR2BQ13705 512 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 CCDC129Q6ZRS4 1044 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 CCDC136Q96JN2 1154 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 TOX2Q96NM4 488 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 ACAD9Q9H845 621 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 SPC25Q9HBM1 224 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 PRDM5Q9NQX1 630 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 PDLIM7Q9NR12 457 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 MTMR10Q9NXD2 777 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 ISY1Q9ULR0 285 aaKnown RBP13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 LAMA2P24043 3122 aaKnown RBP13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 SYNRGQ9UMZ2 1314 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 CLTBP09497 229 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 CST5P28325 142 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 VPS53Q5VIR6 699 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 CENPQQ7L2Z9 268 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 ANKRD33Q7Z3H0 272 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 PCSK9Q8NBP7 692 aaKnown RBP13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 SLC17A8Q8NDX2 589 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 KLHDC9Q8NEP7 349 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 BADQ92934 168 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 OSBPL3Q9H4L5 887 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 ZHX1Q9UKY1 873 aaPredicted RBP13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 STXBP5LQ9Y2K9 1186 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 ZMYM6O95789 1325 aa13.12□□□□□ -0.31
AMBRA1-204ENST00000526545 TRIM43BA6NCK2 446 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 ASB14A6NK59 587 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 DCDC2CA8MYV0 355 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 FGAP02671 866 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 MFAP1P55081 439 aaKnown RBP13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 KCNA10Q16322 511 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 CCDC144BQ3MJ40 725 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 CCSAPQ6IQ19 270 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 ARMCX2Q7L311 632 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 FAM133AQ8N9E0 248 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 DCAF4Q8WV16 495 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 TRIM43Q96BQ3 446 aaPredicted RBP13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 FGD4Q96M96 766 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 AGBL1Q96MI9 1066 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 TRERF1Q96PN7 1200 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 INCENPQ9NQS7 918 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 HOMER2Q9NSB8 354 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 TCP11L1Q9NUJ3 509 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 ZNF536O15090 1300 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 ELP1O95163 1332 aa13.11□□□□□ -0.31
AMBRA1-204ENST00000526545 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 NMT2O60551 498 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 HSPD1P10809 573 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 GJA9P57773 515 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 NKX3-2P78367 333 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 SHHQ15465 462 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 KCTD1Q719H9 257 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 Q7L0L9 218 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 SH3RF1Q7Z6J0 888 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 PLEKHM2Q8IWE5 1019 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 CCDC144CPQ8IYA2 1237 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 LENG1Q96BZ8 264 aaPredicted RBP13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 FAM227BQ96M60 508 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 GLT1D1Q96MS3 346 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 TTC14Q96N46 770 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 UPF3AQ9H1J1 476 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 A1CFQ9NQ94 594 aaKnown RBP13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 STARD7Q9NQZ5 370 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 PRR12Q9ULL5 1215 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 MROH7Q68CQ1 1323 aa13.1□□□□□ -0.31
AMBRA1-204ENST00000526545 LTBP2Q14767 1821 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 A0A0D9SFI3 127 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 TRIM6-TRIM34B2RNG4 842 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 ICAM1P05362 532 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 C6orf222P0C671 652 aaPredicted RBP13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 ALAS1P13196 640 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 RAG1P15918 1043 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 NT5C2P49902 561 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 CNTN2Q02246 1040 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 FAAP100Q0VG06 881 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 BTNL9Q6UXG8 535 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 TOMM22Q9NS69 142 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 TMEM39AQ9NV64 488 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 PNMA2Q9UL42 364 aa13.09□□□□□ -0.31
AMBRA1-204ENST00000526545 SOWAHBA6NEL2 793 aa13.08□□□□□ -0.32
AMBRA1-204ENST00000526545 ASGR1P07306 291 aa13.08□□□□□ -0.32
AMBRA1-204ENST00000526545 CDK7P50613 346 aa13.08□□□□□ -0.32
AMBRA1-204ENST00000526545 SMAD3P84022 425 aaKnown RBP13.08□□□□□ -0.32
AMBRA1-204ENST00000526545 TNFAIP2Q03169 654 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms