RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 DNAJA2O60884 412 aa7.38□□□□□ -1.23
C11orf54-203ENST00000526335 MPOP05164 745 aa7.38□□□□□ -1.23
C11orf54-203ENST00000526335 LIMS1P48059 325 aa7.38□□□□□ -1.23
C11orf54-203ENST00000526335 PCBP3P57721 371 aaKnown RBP7.38□□□□□ -1.23
C11orf54-203ENST00000526335 PWP1Q13610 501 aa7.38□□□□□ -1.23
C11orf54-203ENST00000526335 MPP2Q14168 576 aa7.38□□□□□ -1.23
C11orf54-203ENST00000526335 REC114Q7Z4M0 266 aa7.38□□□□□ -1.23
C11orf54-203ENST00000526335 TCTN2Q96GX1 697 aa7.38□□□□□ -1.23
C11orf54-203ENST00000526335 KLHL14Q9P2G3 628 aa7.38□□□□□ -1.23
C11orf54-203ENST00000526335 TCFL5Q9UL49 500 aa7.38□□□□□ -1.23
C11orf54-203ENST00000526335 ERVFRD-1P60508 538 aa7.37□□□□□ -1.23
C11orf54-203ENST00000526335 FAM160A1Q05DH4 1040 aa7.37□□□□□ -1.23
C11orf54-203ENST00000526335 USP51Q70EK9 711 aa7.37□□□□□ -1.23
C11orf54-203ENST00000526335 TMC4Q7Z404 712 aa7.37□□□□□ -1.23
C11orf54-203ENST00000526335 ZNF655Q8N720 491 aaPredicted RBP7.37□□□□□ -1.23
C11orf54-203ENST00000526335 FAM161BQ96MY7 647 aa7.37□□□□□ -1.23
C11orf54-203ENST00000526335 RBM15Q96T37 977 aaKnown RBP eCLIP7.37□□□□□ -1.23
C11orf54-203ENST00000526335 RSRP1Q9BUV0 290 aa7.37□□□□□ -1.23
C11orf54-203ENST00000526335 UNCXA6NJT0 531 aa7.36□□□□□ -1.23
C11orf54-203ENST00000526335 FKTNO75072 461 aa7.36□□□□□ -1.23
C11orf54-203ENST00000526335 RAG1P15918 1043 aa7.36□□□□□ -1.23
C11orf54-203ENST00000526335 LIPIQ6XZB0 460 aa7.36□□□□□ -1.23
C11orf54-203ENST00000526335 SPRED1Q7Z699 444 aa7.36□□□□□ -1.23
C11orf54-203ENST00000526335 GOLM1Q8NBJ4 401 aa7.36□□□□□ -1.23
C11orf54-203ENST00000526335 HHIPL1Q96JK4 782 aa7.36□□□□□ -1.23
C11orf54-203ENST00000526335 UBOX5O94941 541 aa7.35□□□□□ -1.23
C11orf54-203ENST00000526335 ARSHQ5FYA8 562 aa7.35□□□□□ -1.23
C11orf54-203ENST00000526335 TMC3Q7Z5M5 1100 aa7.35□□□□□ -1.23
C11orf54-203ENST00000526335 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.35□□□□□ -1.23
C11orf54-203ENST00000526335 LOC105371045A0A1W2PR82 267 aa7.34□□□□□ -1.23
C11orf54-203ENST00000526335 TMEM82A0PJX8 343 aa7.34□□□□□ -1.23
C11orf54-203ENST00000526335 MINDY4BA8MYZ0 360 aa7.34□□□□□ -1.23
C11orf54-203ENST00000526335 SYPP08247 313 aa7.34□□□□□ -1.23
C11orf54-203ENST00000526335 TMEM62Q0P6H9 643 aa7.34□□□□□ -1.23
C11orf54-203ENST00000526335 RAB3GAP1Q15042 981 aa7.34□□□□□ -1.23
C11orf54-203ENST00000526335 DNAJC14Q6Y2X3 702 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-203ENST00000526335 LINC00116Q8NCU8 138 aa7.34□□□□□ -1.23
C11orf54-203ENST00000526335 FBXO27Q8NI29 283 aa7.34□□□□□ -1.23
C11orf54-203ENST00000526335 SH3RF3Q8TEJ3 882 aaPredicted RBP7.34□□□□□ -1.23
C11orf54-203ENST00000526335 SUSD2Q9UGT4 822 aa7.34□□□□□ -1.23
C11orf54-203ENST00000526335 TLR3O15455 904 aaKnown RBP7.33□□□□□ -1.24
C11orf54-203ENST00000526335 IGSF3O75054 1194 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 FZD7O75084 574 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 RTP1P59025 263 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 NBPF9Q3BBW0 867 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 BBS9Q3SYG4 887 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 TTC9BQ8N6N2 239 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 SAMD11Q96NU1 681 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 SORBS3O60504 671 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 SNW1Q13573 536 aaKnown RBP7.33□□□□□ -1.24
C11orf54-203ENST00000526335 CWF19L2Q2TBE0 894 aaKnown RBP7.33□□□□□ -1.24
C11orf54-203ENST00000526335 NBPF12Q5TAG4 269 aaPredicted RBP7.33□□□□□ -1.24
C11orf54-203ENST00000526335 CRIP3Q6Q6R5 217 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 ZPBP2Q6X784 338 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 FAM196AQ6ZSG2 479 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 PLCD4Q9BRC7 762 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 MRS2Q9HD23 443 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 VTI1BQ9UEU0 232 aa7.33□□□□□ -1.24
C11orf54-203ENST00000526335 NUDT19A8MXV4 375 aa7.32□□□□□ -1.24
C11orf54-203ENST00000526335 PRAMEF1O95521 474 aa7.32□□□□□ -1.24
C11orf54-203ENST00000526335 ERCC3P19447 782 aa7.32□□□□□ -1.24
C11orf54-203ENST00000526335 VWA3BQ502W6 1294 aa7.32□□□□□ -1.24
C11orf54-203ENST00000526335 GALNT18Q6P9A2 607 aa7.32□□□□□ -1.24
C11orf54-203ENST00000526335 CHST13Q8NET6 341 aa7.32□□□□□ -1.24
C11orf54-203ENST00000526335 FCRL2Q96LA5 508 aaPredicted RBP7.32□□□□□ -1.24
C11orf54-203ENST00000526335 GMIPQ9P107 970 aa7.32□□□□□ -1.24
C11orf54-203ENST00000526335 TNFRSF10DQ9UBN6 386 aa7.32□□□□□ -1.24
C11orf54-203ENST00000526335 TAF6LQ9Y6J9 622 aa7.32□□□□□ -1.24
C11orf54-203ENST00000526335 PFKLP17858 780 aa7.31□□□□□ -1.24
C11orf54-203ENST00000526335 GARTP22102 1010 aa7.31□□□□□ -1.24
C11orf54-203ENST00000526335 IGFBP6P24592 240 aaPredicted RBP7.31□□□□□ -1.24
C11orf54-203ENST00000526335 ARL4AP40617 200 aa7.31□□□□□ -1.24
C11orf54-203ENST00000526335 RAD51AP2Q09MP3 1159 aa7.31□□□□□ -1.24
C11orf54-203ENST00000526335 PCED1AQ9H1Q7 454 aa7.31□□□□□ -1.24
C11orf54-203ENST00000526335 PCDHB14Q9Y5E9 798 aa7.31□□□□□ -1.24
C11orf54-203ENST00000526335 WTIPA6NIX2 430 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-203ENST00000526335 SIGLEC6O43699 453 aa7.3□□□□□ -1.24
C11orf54-203ENST00000526335 POLR2BP30876 1174 aaKnown RBP7.3□□□□□ -1.24
C11orf54-203ENST00000526335 LAPTM5Q13571 262 aa7.3□□□□□ -1.24
C11orf54-203ENST00000526335 HSF5Q4G112 596 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-203ENST00000526335 DVL3Q92997 716 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-203ENST00000526335 LNPKQ9C0E8 428 aa7.3□□□□□ -1.24
C11orf54-203ENST00000526335 PRDM14Q9GZV8 571 aa7.3□□□□□ -1.24
C11orf54-203ENST00000526335 BRMS1Q9HCU9 246 aa7.3□□□□□ -1.24
C11orf54-203ENST00000526335 GPR55Q9Y2T6 319 aaPredicted RBP7.3□□□□□ -1.24
C11orf54-203ENST00000526335 ROBO2Q9HCK4 1378 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 FADS2P1A8MWK0 482 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 NOBOXO60393 691 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 CLEC3AO75596 197 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 ENDOUP21128 410 aaKnown RBP7.29□□□□□ -1.24
C11orf54-203ENST00000526335 FBLN1P23142 703 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 ITGAEP38570 1179 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 OVOS1Q6IE37 1185 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 FNIP1Q8TF40 1166 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 BCL2L13Q9BXK5 485 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 LRRC3Q9BY71 257 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 CHST7Q9NS84 486 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 KBTBD4Q9NVX7 518 aa7.29□□□□□ -1.24
C11orf54-203ENST00000526335 ATE1O95260 518 aa7.28□□□□□ -1.24
C11orf54-203ENST00000526335 GJA9P57773 515 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms