RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 ZBTB43O43298 467 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 COPB2P35606 906 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 RCAN1P53805 252 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 PRMT2P55345 433 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 APOBRQ0VD83 1088 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 TOB2Q14106 344 aaPredicted RBP15.05■□□□□ -0
SMPD1-202ENST00000526280 SLC35G1Q2M3R5 365 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 SNRNP48Q6IEG0 339 aaKnown RBP15.05■□□□□ -0
SMPD1-202ENST00000526280 CCDC174Q6PII3 467 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 MICU3Q86XE3 530 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 NCAPG2Q86XI2 1143 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 RAB11FIP4Q86YS3 637 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 ABHD8Q96I13 439 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 AGBL1Q96MI9 1066 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 MCOLN1Q9GZU1 580 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 ALDH8A1Q9H2A2 487 aaPredicted RBP15.05■□□□□ -0
SMPD1-202ENST00000526280 RIOX1Q9H6W3 641 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 JMJD4Q9H9V9 463 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 GJD2Q9UKL4 321 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 RIPK3Q9Y572 518 aa15.05■□□□□ -0
SMPD1-202ENST00000526280 CYTH3O43739 400 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 STRNO43815 780 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 ICAM1P05362 532 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 PTPREP23469 700 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 SMARCA1P28370 1054 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 GNAQP50148 359 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 PRKCZQ05513 592 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 WDR78Q5VTH9 848 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 NBPF11Q86T75 865 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 CCDC144CPQ8IYA2 1237 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 MTMR8Q96EF0 704 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 KIF2CQ99661 725 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 LZTS2Q9BRK4 669 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 CWC22Q9HCG8 908 aaKnown RBP15.04■□□□□ -0
SMPD1-202ENST00000526280 VAT1LQ9HCJ6 419 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 GABRQQ9UN88 632 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 PTPN22Q9Y2R2 807 aa15.04■□□□□ -0
SMPD1-202ENST00000526280 BAZ2BQ9UIF8 2168 aaKnown RBP15.04■□□□□ -0
SMPD1-202ENST00000526280 DHX16O60231 1041 aaKnown RBP15.03■□□□□ -0
SMPD1-202ENST00000526280 SLC4A3P48751 1232 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 FLT3LGP49771 235 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 PPP2R5BQ15173 497 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 CDC37Q16543 378 aaPredicted RBP15.03■□□□□ -0
SMPD1-202ENST00000526280 TKFCQ3LXA3 575 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 MORN1Q5T089 497 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 SPZ1Q9BXG8 430 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 PNMA2Q9UL42 364 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 CCPG1Q9ULG6 757 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 HPS5Q9UPZ3 1129 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 IVNS1ABPQ9Y6Y0 642 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 SMCHD1A6NHR9 2005 aa15.03■□□□□ -0
SMPD1-202ENST00000526280 SLC15A5A6NIM6 579 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 GOLGA8BA8MQT2 603 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 PLEKHA8P1O95397 391 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 PDIA3P30101 505 aaKnown RBP15.02■□□□□ -0
SMPD1-202ENST00000526280 NEK4P51957 841 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 IRF5Q13568 498 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 GRB14Q14449 540 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 RTN1Q16799 776 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 QRICH1Q2TAL8 776 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 FBXO46Q6PJ61 603 aaPredicted RBP15.02■□□□□ -0
SMPD1-202ENST00000526280 TMTC3Q6ZXV5 915 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.02■□□□□ -0
SMPD1-202ENST00000526280 ABRAQ8N0Z2 381 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 SRBD1Q8N5C6 995 aaKnown RBP15.02■□□□□ -0
SMPD1-202ENST00000526280 CHST13Q8NET6 341 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 SOCS4Q8WXH5 440 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 USP6NLQ92738 828 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 ZNF274Q96GC6 653 aaPredicted RBP15.02■□□□□ -0
SMPD1-202ENST00000526280 NUDT12Q9BQG2 462 aa15.02■□□□□ -0
SMPD1-202ENST00000526280 FAM217BQ9NTX9 383 aaPredicted RBP15.02■□□□□ -0
SMPD1-202ENST00000526280 RBM28Q9NW13 759 aaKnown RBP15.02■□□□□ -0
SMPD1-202ENST00000526280 NAP1L2Q9ULW6 460 aaPredicted RBP15.02■□□□□ -0
SMPD1-202ENST00000526280 PLXNB2O15031 1838 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 GOLGA8AA7E2F4 631 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 ZBTB5O15062 677 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 FCER1AP12319 257 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 ALAS1P13196 640 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 METAP2P50579 478 aaKnown RBP eCLIP15.01□□□□□ -0.01
SMPD1-202ENST00000526280 ANKRD1Q15327 319 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 CMTR1Q8N1G2 835 aaKnown RBP15.01□□□□□ -0.01
SMPD1-202ENST00000526280 TBC1D32Q96NH3 1257 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 TRERF1Q96PN7 1200 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 LARP6Q9BRS8 491 aaKnown RBP15.01□□□□□ -0.01
SMPD1-202ENST00000526280 HOMER2Q9NSB8 354 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 FBXO40Q9UH90 709 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 PTCH2Q9Y6C5 1203 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 NID2Q14112 1375 aa15.01□□□□□ -0.01
SMPD1-202ENST00000526280 CCDC196A0A1B0GTZ2 297 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 XRCC5P13010 732 aaKnown RBP15□□□□□ -0.01
SMPD1-202ENST00000526280 TAL1P17542 331 aaPredicted RBP15□□□□□ -0.01
SMPD1-202ENST00000526280 ADORA2AP29274 412 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 CDC27P30260 824 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 ADD1P35611 737 aaKnown RBP15□□□□□ -0.01
SMPD1-202ENST00000526280 RGS2P41220 211 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 AK2P54819 239 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 FUT2Q10981 343 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 MAP2K5Q13163 448 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 KCTD2Q14681 263 aa15□□□□□ -0.01
SMPD1-202ENST00000526280 FBXO11Q86XK2 927 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms