RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 GCC2Q8IWJ2 1684 aa6.42□□□□□ -1.38
USP48-211ENST00000526044 ERBINQ96RT1 1412 aa6.42□□□□□ -1.38
USP48-211ENST00000526044 RBAK-RBAKDNI3L0D1 243 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 LRRN2O75325 713 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 CLEC3AO75596 197 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 CD96P40200 585 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 NASPP49321 788 aaPredicted RBP6.41□□□□□ -1.38
USP48-211ENST00000526044 IKZF1Q13422 519 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 GNL2Q13823 731 aaKnown RBP6.41□□□□□ -1.38
USP48-211ENST00000526044 ANGEL2Q5VTE6 544 aaKnown RBP6.41□□□□□ -1.38
USP48-211ENST00000526044 WFDC3Q8IUB2 231 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 TAB3Q8N5C8 712 aaPredicted RBP6.41□□□□□ -1.38
USP48-211ENST00000526044 DTWD2Q8NBA8 298 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 UBE2FQ969M7 185 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 VWCEQ96DN2 955 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 DHRS1Q96LJ7 313 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 SLC9A7Q96T83 725 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 MPHOSPH9Q99550 1183 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 TRIT1Q9H3H1 467 aaKnown RBP6.41□□□□□ -1.38
USP48-211ENST00000526044 CAPN10Q9HC96 672 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 ZSWIM5Q9P217 1185 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 NUP155O75694 1391 aa6.41□□□□□ -1.38
USP48-211ENST00000526044 FUT4P22083 530 aa6.4□□□□□ -1.38
USP48-211ENST00000526044 EIF6P56537 245 aaKnown RBP6.4□□□□□ -1.38
USP48-211ENST00000526044 PLCL1Q15111 1095 aa6.4□□□□□ -1.38
USP48-211ENST00000526044 NBPF12Q5TAG4 269 aaPredicted RBP6.4□□□□□ -1.38
USP48-211ENST00000526044 CCDC81Q6ZN84 652 aa6.4□□□□□ -1.38
USP48-211ENST00000526044 CPLX3Q8WVH0 158 aa6.4□□□□□ -1.38
USP48-211ENST00000526044 SRRTQ9BXP5 876 aaKnown RBP6.4□□□□□ -1.38
USP48-211ENST00000526044 GPR62Q9BZJ7 368 aa6.4□□□□□ -1.38
USP48-211ENST00000526044 DUSP15Q9H1R2 295 aaPredicted RBP6.4□□□□□ -1.38
USP48-211ENST00000526044 ATP13A1Q9HD20 1204 aa6.4□□□□□ -1.38
USP48-211ENST00000526044 GPATCH2Q9NW75 528 aa6.4□□□□□ -1.38
USP48-211ENST00000526044 LMCD1Q9NZU5 365 aa6.4□□□□□ -1.38
USP48-211ENST00000526044 WASHC2CQ9Y4E1 1318 aa6.4□□□□□ -1.39
USP48-211ENST00000526044 KANK1Q14678 1352 aa6.4□□□□□ -1.39
USP48-211ENST00000526044 REREQ9P2R6 1566 aa6.4□□□□□ -1.39
USP48-211ENST00000526044 EIF2AK4Q9P2K8 1649 aaKnown RBP6.39□□□□□ -1.39
USP48-211ENST00000526044 ACRP10323 421 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 ATF4P18848 351 aaPredicted RBP6.39□□□□□ -1.39
USP48-211ENST00000526044 GUCY2CP25092 1073 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 GIPRP48546 466 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 ZNF124Q15973 351 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 TMPRSS7Q7RTY8 843 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 LSRQ86X29 649 aaPredicted RBP6.39□□□□□ -1.39
USP48-211ENST00000526044 KSR1Q8IVT5 923 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 TMEM192Q8IY95 271 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 OR6P1Q8NGX9 317 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 PI4K2BQ8TCG2 481 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 SLC6A18Q96N87 628 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 SLC38A3Q99624 504 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 STRIP2Q9ULQ0 834 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 AGLP35573 1532 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 ARHGEF40Q8TER5 1519 aa6.39□□□□□ -1.39
USP48-211ENST00000526044 PAPLNO95428 1278 aa6.38□□□□□ -1.39
USP48-211ENST00000526044 SRFP11831 508 aa6.38□□□□□ -1.39
USP48-211ENST00000526044 ZP2Q05996 745 aa6.38□□□□□ -1.39
USP48-211ENST00000526044 RUFY4Q6ZNE9 571 aa6.38□□□□□ -1.39
USP48-211ENST00000526044 ASCC2Q9H1I8 757 aaPredicted RBP6.38□□□□□ -1.39
USP48-211ENST00000526044 BCORL1Q5H9F3 1711 aa6.37□□□□□ -1.39
USP48-211ENST00000526044 TPP2P29144 1249 aaPredicted RBP6.37□□□□□ -1.39
USP48-211ENST00000526044 NBPF9Q3BBW0 867 aa6.37□□□□□ -1.39
USP48-211ENST00000526044 SLC23A3Q6PIS1 610 aa6.37□□□□□ -1.39
USP48-211ENST00000526044 UNC5AQ6ZN44 842 aa6.37□□□□□ -1.39
USP48-211ENST00000526044 TSPYL5Q86VY4 417 aaPredicted RBP6.37□□□□□ -1.39
USP48-211ENST00000526044 ENOX1Q8TC92 643 aaKnown RBP6.37□□□□□ -1.39
USP48-211ENST00000526044 SHDQ96IW2 340 aa6.37□□□□□ -1.39
USP48-211ENST00000526044 SIGLEC1Q9BZZ2 1709 aa6.36□□□□□ -1.39
USP48-211ENST00000526044 UNC13BO14795 1591 aa6.36□□□□□ -1.39
USP48-211ENST00000526044 FAM86C2PA6NEL3 165 aa6.36□□□□□ -1.39
USP48-211ENST00000526044 CLEC16AQ2KHT3 1053 aa6.36□□□□□ -1.39
USP48-211ENST00000526044 ZNF792Q3KQV3 632 aa6.36□□□□□ -1.39
USP48-211ENST00000526044 ZNF512BQ96KM6 892 aaPredicted RBP6.36□□□□□ -1.39
USP48-211ENST00000526044 MKRN2Q9H000 416 aaKnown RBP6.36□□□□□ -1.39
USP48-211ENST00000526044 CARS2Q9HA77 564 aaKnown RBP6.36□□□□□ -1.39
USP48-211ENST00000526044 SUCOQ9UBS9 1254 aaKnown RBP6.36□□□□□ -1.39
USP48-211ENST00000526044 SLC12A7Q9Y666 1083 aa6.36□□□□□ -1.39
USP48-211ENST00000526044 CFAP65Q6ZU64 1925 aaKnown RBP6.36□□□□□ -1.39
USP48-211ENST00000526044 DEPDC5O75140 1603 aa6.36□□□□□ -1.39
USP48-211ENST00000526044 RNF17Q9BXT8 1623 aaKnown RBP6.36□□□□□ -1.39
USP48-211ENST00000526044 WASH4PA8MWX3 477 aa6.35□□□□□ -1.39
USP48-211ENST00000526044 ESR1P03372 595 aa6.35□□□□□ -1.39
USP48-211ENST00000526044 PMS1P54277 932 aaKnown RBP6.35□□□□□ -1.39
USP48-211ENST00000526044 NMIQ13287 307 aaPredicted RBP6.35□□□□□ -1.39
USP48-211ENST00000526044 ZYXQ15942 572 aaKnown RBP6.35□□□□□ -1.39
USP48-211ENST00000526044 GAB4Q2WGN9 574 aa6.35□□□□□ -1.39
USP48-211ENST00000526044 SPOCD1Q6ZMY3 1216 aa6.35□□□□□ -1.39
USP48-211ENST00000526044 CREG2Q8IUH2 290 aa6.35□□□□□ -1.39
USP48-211ENST00000526044 C19orf47Q8N9M1 422 aaKnown RBP6.35□□□□□ -1.39
USP48-211ENST00000526044 TINF2Q9BSI4 451 aa6.35□□□□□ -1.39
USP48-211ENST00000526044 MBNL3Q9NUK0 354 aaKnown RBP6.35□□□□□ -1.39
USP48-211ENST00000526044 ZMYM3Q14202 1370 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 DHX57Q6P158 1386 aaKnown RBP6.34□□□□□ -1.39
USP48-211ENST00000526044 SHISA3A0PJX4 238 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 RNASE1P07998 156 aaKnown RBP6.34□□□□□ -1.39
USP48-211ENST00000526044 ARID5AQ03989 594 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 AUHQ13825 339 aaKnown RBP6.34□□□□□ -1.39
USP48-211ENST00000526044 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 BBS9Q3SYG4 887 aa6.34□□□□□ -1.39
USP48-211ENST00000526044 LCE4AQ5TA78 99 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms