RNA–Protein interactions for RNA: ENST00000525874.1

SYVN1-205, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-205ENST00000525874 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
SYVN1-205ENST00000525874 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
SYVN1-205ENST00000525874 PBX4Q9BYU1 374 aa13.23□□□□□ -0.29
SYVN1-205ENST00000525874 SLC38A10Q9HBR0 1119 aa13.23□□□□□ -0.29
SYVN1-205ENST00000525874 CLIP2Q9UDT6 1046 aa13.23□□□□□ -0.29
SYVN1-205ENST00000525874 FBXO40Q9UH90 709 aa13.23□□□□□ -0.29
SYVN1-205ENST00000525874 GRXCR1A8MXD5 290 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 CSF2RAP15509 400 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 PBX2P40425 430 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 FAM126BQ8IXS8 530 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 TMEM199Q8N511 208 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 CHST13Q8NET6 341 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 MKL1Q969V6 931 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 PPP1R12CQ9BZL4 782 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 LRRCC1Q9C099 1032 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 FEM1BQ9UK73 627 aa13.22□□□□□ -0.29
SYVN1-205ENST00000525874 MUC3AQ02505 3323 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 CTAGE5O15320 804 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 TLR3O15455 904 aaKnown RBP13.21□□□□□ -0.29
SYVN1-205ENST00000525874 SMARCA5O60264 1052 aaPredicted RBP13.21□□□□□ -0.29
SYVN1-205ENST00000525874 ACRP10323 421 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 OAZ1P54368 228 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 PSRC1Q6PGN9 363 aaPredicted RBP13.21□□□□□ -0.29
SYVN1-205ENST00000525874 CCDC129Q6ZRS4 1044 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 ZNF365Q70YC5 407 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 CCDC144CPQ8IYA2 1237 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 ZNF444Q8N0Y2 327 aaPredicted RBP13.21□□□□□ -0.29
SYVN1-205ENST00000525874 OSBP2Q969R2 916 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 CEP95Q96GE4 821 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 GAS2L1Q99501 681 aaPredicted RBP13.21□□□□□ -0.29
SYVN1-205ENST00000525874 KATNBL1Q9H079 304 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 CHMP4BQ9H444 224 aaKnown RBP13.21□□□□□ -0.29
SYVN1-205ENST00000525874 EPB41L4AQ9HCS5 686 aaPredicted RBP13.21□□□□□ -0.29
SYVN1-205ENST00000525874 ECHDC1Q9NTX5 307 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 SYNPO2Q9UMS6 1093 aa13.21□□□□□ -0.29
SYVN1-205ENST00000525874 PRDM1O75626 825 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 TTLL1O95922 423 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 NKX3-2P78367 333 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 CNTN2Q02246 1040 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 LRRC47Q8N1G4 583 aaKnown RBP13.2□□□□□ -0.3
SYVN1-205ENST00000525874 KBTBD3Q8NAB2 608 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 GMCL1P1Q8NEA9 526 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 APPBP2Q92624 585 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 PRDM12Q9H4Q4 367 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 ZNF287Q9HBT7 754 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 HOMER2Q9NSB8 354 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 MTMR4Q9NYA4 1195 aa13.2□□□□□ -0.3
SYVN1-205ENST00000525874 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.19□□□□□ -0.3
SYVN1-205ENST00000525874 TNFRSF10AO00220 468 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
SYVN1-205ENST00000525874 GPAA1O43292 621 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 CD4P01730 458 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 BMP3P12645 472 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 CYP2C18P33260 490 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 TDO2P48775 406 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 BEX3Q00994 111 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 AKNAD1Q5T1N1 836 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 SLFN13Q68D06 897 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 PPM1EQ8WY54 764 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 HERVK_113Q902F9 699 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 ACAD9Q9H845 621 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 IL23AQ9NPF7 189 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 NCOR1O75376 2440 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 GBF1Q92538 1859 aa13.19□□□□□ -0.3
SYVN1-205ENST00000525874 ASTN1O14525 1302 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 TMEM232C9JQI7 657 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 M0R2C6 588 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 APPP05067 770 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 FDX1P10109 184 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 GNAT2P19087 354 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 TNFAIP2Q03169 654 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 RAB30Q15771 203 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 CXCL17Q6UXB2 119 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
SYVN1-205ENST00000525874 SLC43A3Q8NBI5 491 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 ATXN2LQ8WWM7 1075 aaKnown RBP13.18□□□□□ -0.3
SYVN1-205ENST00000525874 A1CFQ9NQ94 594 aaKnown RBP13.18□□□□□ -0.3
SYVN1-205ENST00000525874 CXXC1Q9P0U4 656 aaPredicted RBP13.18□□□□□ -0.3
SYVN1-205ENST00000525874 MSRAQ9UJ68 235 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
SYVN1-205ENST00000525874 PLIN4Q96Q06 1357 aa13.18□□□□□ -0.3
SYVN1-205ENST00000525874 ZNF536O15090 1300 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 LRRC37A2A6NM11 1700 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 CHD9Q3L8U1 2897 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 SOWAHBA6NEL2 793 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 ASB14A6NK59 587 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 CABYRO75952 493 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 FGBP02675 491 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
SYVN1-205ENST00000525874 TSPY3P0CV98 308 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 TSPY8P0CW00 308 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 STAT2P52630 851 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 ADGRE1Q14246 886 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 TLK2Q86UE8 772 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 NEDD1Q8NHV4 660 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 AGBL1Q96MI9 1066 aa13.17□□□□□ -0.3
SYVN1-205ENST00000525874 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms