RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PATL2C9JE40 543 aaKnown RBP28.53■■■□□ 2.16
USP47-205ENST00000525257 CST5P28325 142 aaPredicted RBP28.53■■■□□ 2.16
USP47-205ENST00000525257 SLFN13Q68D06 897 aa28.53■■■□□ 2.16
USP47-205ENST00000525257 ARMCX2Q7L311 632 aa28.53■■■□□ 2.16
USP47-205ENST00000525257 TBX21Q9UL17 535 aa28.53■■■□□ 2.16
USP47-205ENST00000525257 SYNPO2Q9UMS6 1093 aa28.53■■■□□ 2.16
USP47-205ENST00000525257 PLIN4Q96Q06 1357 aa28.52■■■□□ 2.16
USP47-205ENST00000525257 SPTBN5Q9NRC6 3674 aaKnown RBP28.52■■■□□ 2.16
USP47-205ENST00000525257 TIMP1P01033 207 aa28.52■■■□□ 2.16
USP47-205ENST00000525257 ASGR1P07306 291 aa28.52■■■□□ 2.16
USP47-205ENST00000525257 TSPY3P0CV98 308 aa28.52■■■□□ 2.16
USP47-205ENST00000525257 TSPY8P0CW00 308 aa28.52■■■□□ 2.16
USP47-205ENST00000525257 BMP3P12645 472 aa28.52■■■□□ 2.16
USP47-205ENST00000525257 OAZ1P54368 228 aa28.52■■■□□ 2.16
USP47-205ENST00000525257 PCSK9Q8NBP7 692 aaKnown RBP28.52■■■□□ 2.16
USP47-205ENST00000525257 VTI1AQ96AJ9 217 aa28.52■■■□□ 2.16
USP47-205ENST00000525257 SEC62Q99442 399 aaKnown RBP28.52■■■□□ 2.16
USP47-205ENST00000525257 SPC25Q9HBM1 224 aa28.52■■■□□ 2.16
USP47-205ENST00000525257 ELP1O95163 1332 aa28.51■■■□□ 2.15
USP47-205ENST00000525257 TMEM265A0A087WTH1 108 aa28.51■■■□□ 2.15
USP47-205ENST00000525257 CCDC144CPQ8IYA2 1237 aa28.51■■■□□ 2.15
USP47-205ENST00000525257 NEDD1Q8NHV4 660 aa28.51■■■□□ 2.15
USP47-205ENST00000525257 CHMP4CQ96CF2 233 aa28.51■■■□□ 2.15
USP47-205ENST00000525257 NACAP1Q9BZK3 213 aa28.51■■■□□ 2.15
USP47-205ENST00000525257 UPF3AQ9H1J1 476 aaKnown RBP28.51■■■□□ 2.15
USP47-205ENST00000525257 MROH7Q68CQ1 1323 aa28.5■■■□□ 2.15
USP47-205ENST00000525257 TMEM232C9JQI7 657 aa28.5■■■□□ 2.15
USP47-205ENST00000525257 GJA9P57773 515 aa28.5■■■□□ 2.15
USP47-205ENST00000525257 CNTN2Q02246 1040 aa28.5■■■□□ 2.15
USP47-205ENST00000525257 PDE4BQ07343 736 aa28.5■■■□□ 2.15
USP47-205ENST00000525257 LRRFIP1Q32MZ4 808 aaKnown RBP28.5■■■□□ 2.15
USP47-205ENST00000525257 DNAJB2P25686 324 aa28.49■■■□□ 2.15
USP47-205ENST00000525257 CDK7P50613 346 aa28.49■■■□□ 2.15
USP47-205ENST00000525257 TFAP4Q01664 338 aa28.49■■■□□ 2.15
USP47-205ENST00000525257 GNASQ5JWF2 1037 aa28.49■■■□□ 2.15
USP47-205ENST00000525257 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.49■■■□□ 2.15
USP47-205ENST00000525257 NAPBQ9H115 298 aa28.49■■■□□ 2.15
USP47-205ENST00000525257 A0A0U1RQG5 324 aaPredicted RBP28.48■■■□□ 2.15
USP47-205ENST00000525257 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.48■■■□□ 2.15
USP47-205ENST00000525257 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.48■■■□□ 2.15
USP47-205ENST00000525257 STAT2P52630 851 aa28.48■■■□□ 2.15
USP47-205ENST00000525257 IKQ13123 557 aaPredicted RBP28.48■■■□□ 2.15
USP47-205ENST00000525257 MFSD5Q6N075 450 aa28.48■■■□□ 2.15
USP47-205ENST00000525257 KATNBL1Q9H079 304 aa28.48■■■□□ 2.15
USP47-205ENST00000525257 ACAD9Q9H845 621 aa28.48■■■□□ 2.15
USP47-205ENST00000525257 SLC3A2P08195 630 aaKnown RBP28.47■■■□□ 2.15
USP47-205ENST00000525257 PPARAQ07869 468 aa28.47■■■□□ 2.15
USP47-205ENST00000525257 GRIN2CQ14957 1233 aa28.47■■■□□ 2.15
USP47-205ENST00000525257 AGBL1Q96MI9 1066 aa28.47■■■□□ 2.15
USP47-205ENST00000525257 FSD1Q9BTV5 496 aa28.47■■■□□ 2.15
USP47-205ENST00000525257 RNF146Q9NTX7 359 aa28.47■■■□□ 2.15
USP47-205ENST00000525257 TTC41PQ6P2S7 1318 aa28.46■■■□□ 2.15
USP47-205ENST00000525257 ARVCFO00192 962 aa28.46■■■□□ 2.15
USP47-205ENST00000525257 FDX1P10109 184 aa28.46■■■□□ 2.15
USP47-205ENST00000525257 BEX3Q00994 111 aa28.46■■■□□ 2.15
USP47-205ENST00000525257 PPIGQ13427 754 aaKnown RBP eCLIP28.46■■■□□ 2.15
USP47-205ENST00000525257 FAM133AQ8N9E0 248 aa28.46■■■□□ 2.15
USP47-205ENST00000525257 PPP1R12CQ9BZL4 782 aa28.46■■■□□ 2.15
USP47-205ENST00000525257 A1CFQ9NQ94 594 aaKnown RBP28.46■■■□□ 2.15
USP47-205ENST00000525257 ZNF536O15090 1300 aa28.45■■■□□ 2.15
USP47-205ENST00000525257 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.45■■■□□ 2.14
USP47-205ENST00000525257 CTAGE5O15320 804 aa28.45■■■□□ 2.14
USP47-205ENST00000525257 SLC1A4P43007 532 aa28.45■■■□□ 2.14
USP47-205ENST00000525257 NOL8Q76FK4 1167 aaKnown RBP28.45■■■□□ 2.14
USP47-205ENST00000525257 FAM160B2Q86V87 743 aa28.45■■■□□ 2.14
USP47-205ENST00000525257 PI4K2BQ8TCG2 481 aa28.45■■■□□ 2.14
USP47-205ENST00000525257 OTUD7AQ8TE49 926 aaPredicted RBP28.45■■■□□ 2.14
USP47-205ENST00000525257 CHURC1Q8WUH1 139 aa28.45■■■□□ 2.14
USP47-205ENST00000525257 GMCL1Q96IK5 515 aa28.45■■■□□ 2.14
USP47-205ENST00000525257 LRRC37A2A6NM11 1700 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 ERC2O15083 957 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 CSF2RAP15509 400 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 MCCP23508 829 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 TNFAIP2Q03169 654 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 ZMYM1Q5SVZ6 1142 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 C16orf59Q7L2K0 433 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 FAM126BQ8IXS8 530 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 STAG1Q8WVM7 1258 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 TIFAQ96CG3 184 aa28.44■■■□□ 2.14
USP47-205ENST00000525257 SOWAHBA6NEL2 793 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 TLR3O15455 904 aaKnown RBP28.43■■■□□ 2.14
USP47-205ENST00000525257 ALAS1P13196 640 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 SNAP25P60880 206 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 TMEM240Q5SV17 173 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 CCDC174Q6PII3 467 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 KCTD1Q719H9 257 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 TRERF1Q96PN7 1200 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 ZNF576Q9H609 170 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 STX8Q9UNK0 236 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 ASTN1O14525 1302 aa28.43■■■□□ 2.14
USP47-205ENST00000525257 ACRP10323 421 aa28.42■■■□□ 2.14
USP47-205ENST00000525257 RASGRP2Q7LDG7 609 aa28.42■■■□□ 2.14
USP47-205ENST00000525257 TMEM199Q8N511 208 aa28.42■■■□□ 2.14
USP47-205ENST00000525257 DDX49Q9Y6V7 483 aaKnown RBP28.42■■■□□ 2.14
USP47-205ENST00000525257 GRXCR1A8MXD5 290 aa28.41■■■□□ 2.14
USP47-205ENST00000525257 CTDSPL2Q05D32 466 aa28.41■■■□□ 2.14
USP47-205ENST00000525257 TKFCQ3LXA3 575 aa28.41■■■□□ 2.14
USP47-205ENST00000525257 CXCL17Q6UXB2 119 aa28.41■■■□□ 2.14
USP47-205ENST00000525257 CCDC129Q6ZRS4 1044 aa28.41■■■□□ 2.14
USP47-205ENST00000525257 ASB14A6NK59 587 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms