RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 GMCL1Q96IK5 515 aa20.4■□□□□ 0.86
TSKU-202ENST00000525167 GLT1D1Q96MS3 346 aa20.4■□□□□ 0.86
TSKU-202ENST00000525167 UPF3AQ9H1J1 476 aaKnown RBP20.4■□□□□ 0.86
TSKU-202ENST00000525167 STAT2P52630 851 aa20.39■□□□□ 0.85
TSKU-202ENST00000525167 GJA9P57773 515 aa20.39■□□□□ 0.85
TSKU-202ENST00000525167 NKX3-2P78367 333 aa20.39■□□□□ 0.85
TSKU-202ENST00000525167 SLFN13Q68D06 897 aa20.39■□□□□ 0.85
TSKU-202ENST00000525167 FAM160B2Q86V87 743 aa20.39■□□□□ 0.85
TSKU-202ENST00000525167 LRRC47Q8N1G4 583 aaKnown RBP20.39■□□□□ 0.85
TSKU-202ENST00000525167 CHURC1Q8WUH1 139 aa20.39■□□□□ 0.85
TSKU-202ENST00000525167 FGD4Q96M96 766 aa20.39■□□□□ 0.85
TSKU-202ENST00000525167 NAPBQ9H115 298 aa20.39■□□□□ 0.85
TSKU-202ENST00000525167 TIMP1P01033 207 aa20.38■□□□□ 0.85
TSKU-202ENST00000525167 C6orf222P0C671 652 aaPredicted RBP20.38■□□□□ 0.85
TSKU-202ENST00000525167 SLC4A3P48751 1232 aa20.38■□□□□ 0.85
TSKU-202ENST00000525167 EPHB4P54760 987 aa20.38■□□□□ 0.85
TSKU-202ENST00000525167 CCDC144BQ3MJ40 725 aa20.38■□□□□ 0.85
TSKU-202ENST00000525167 ARMCX2Q7L311 632 aa20.38■□□□□ 0.85
TSKU-202ENST00000525167 TTYH1Q9H313 450 aaPredicted RBP20.38■□□□□ 0.85
TSKU-202ENST00000525167 ACAD9Q9H845 621 aa20.38■□□□□ 0.85
TSKU-202ENST00000525167 TBX21Q9UL17 535 aa20.38■□□□□ 0.85
TSKU-202ENST00000525167 PLA2G6O60733 806 aa20.37■□□□□ 0.85
TSKU-202ENST00000525167 CDK7P50613 346 aa20.37■□□□□ 0.85
TSKU-202ENST00000525167 TFAP4Q01664 338 aa20.37■□□□□ 0.85
TSKU-202ENST00000525167 PPARAQ07869 468 aa20.37■□□□□ 0.85
TSKU-202ENST00000525167 TKFCQ3LXA3 575 aa20.37■□□□□ 0.85
TSKU-202ENST00000525167 ZMYM1Q5SVZ6 1142 aa20.37■□□□□ 0.85
TSKU-202ENST00000525167 CCDC174Q6PII3 467 aa20.37■□□□□ 0.85
TSKU-202ENST00000525167 MAFAQ8NHW3 353 aaPredicted RBP20.37■□□□□ 0.85
TSKU-202ENST00000525167 PI4K2BQ8TCG2 481 aa20.37■□□□□ 0.85
TSKU-202ENST00000525167 COL25A1Q9BXS0 654 aaPredicted RBP20.37■□□□□ 0.85
TSKU-202ENST00000525167 TMEM232C9JQI7 657 aa20.36■□□□□ 0.85
TSKU-202ENST00000525167 ASGR1P07306 291 aa20.36■□□□□ 0.85
TSKU-202ENST00000525167 MFSD5Q6N075 450 aa20.36■□□□□ 0.85
TSKU-202ENST00000525167 CCDC144CPQ8IYA2 1237 aa20.36■□□□□ 0.85
TSKU-202ENST00000525167 FAM133AQ8N9E0 248 aa20.36■□□□□ 0.85
TSKU-202ENST00000525167 STAG1Q8WVM7 1258 aa20.36■□□□□ 0.85
TSKU-202ENST00000525167 FSD1Q9BTV5 496 aa20.36■□□□□ 0.85
TSKU-202ENST00000525167 A0A0U1RQG5 324 aaPredicted RBP20.35■□□□□ 0.85
TSKU-202ENST00000525167 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.35■□□□□ 0.85
TSKU-202ENST00000525167 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.35■□□□□ 0.85
TSKU-202ENST00000525167 MYADML2A6NDP7 307 aa20.35■□□□□ 0.85
TSKU-202ENST00000525167 ADCY6O43306 1168 aa20.35■□□□□ 0.85
TSKU-202ENST00000525167 SLC1A4P43007 532 aa20.35■□□□□ 0.85
TSKU-202ENST00000525167 GNASQ5JWF2 1037 aa20.35■□□□□ 0.85
TSKU-202ENST00000525167 SEC62Q99442 399 aaKnown RBP20.35■□□□□ 0.85
TSKU-202ENST00000525167 KATNBL1Q9H079 304 aa20.35■□□□□ 0.85
TSKU-202ENST00000525167 EYSQ5T1H1 3165 aa20.34■□□□□ 0.85
TSKU-202ENST00000525167 CDH23Q9H251 3354 aa20.34■□□□□ 0.85
TSKU-202ENST00000525167 ASB14A6NK59 587 aa20.34■□□□□ 0.85
TSKU-202ENST00000525167 ARVCFO00192 962 aa20.34■□□□□ 0.85
TSKU-202ENST00000525167 PPIGQ13427 754 aaKnown RBP eCLIP20.34■□□□□ 0.85
TSKU-202ENST00000525167 MYLIPQ8WY64 445 aa20.34■□□□□ 0.85
TSKU-202ENST00000525167 A1CFQ9NQ94 594 aaKnown RBP20.34■□□□□ 0.85
TSKU-202ENST00000525167 HOMER2Q9NSB8 354 aa20.34■□□□□ 0.85
TSKU-202ENST00000525167 RNF146Q9NTX7 359 aa20.34■□□□□ 0.85
TSKU-202ENST00000525167 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.34■□□□□ 0.85
TSKU-202ENST00000525167 ZNF536O15090 1300 aa20.33■□□□□ 0.85
TSKU-202ENST00000525167 TLR3O15455 904 aaKnown RBP20.33■□□□□ 0.85
TSKU-202ENST00000525167 FOSL2P15408 326 aa20.33■□□□□ 0.85
TSKU-202ENST00000525167 MX1P20591 662 aa20.33■□□□□ 0.85
TSKU-202ENST00000525167 CNTN2Q02246 1040 aa20.33■□□□□ 0.85
TSKU-202ENST00000525167 IKQ13123 557 aaPredicted RBP20.33■□□□□ 0.85
TSKU-202ENST00000525167 SEZ6LQ9BYH1 1024 aa20.33■□□□□ 0.85
TSKU-202ENST00000525167 ISY1Q9ULR0 285 aaKnown RBP20.33■□□□□ 0.85
TSKU-202ENST00000525167 TSPY2A6NKD2 308 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 CTAGE5O15320 804 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 CABYRO75952 493 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 DNAJB2P25686 324 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 TNFAIP2Q03169 654 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 RCSD1Q6JBY9 416 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 CCDC129Q6ZRS4 1044 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 FAM126BQ8IXS8 530 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 TMEM199Q8N511 208 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 VTI1AQ96AJ9 217 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 STX8Q9UNK0 236 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 MCM3APO60318 1980 aa20.32■□□□□ 0.84
TSKU-202ENST00000525167 MCCP23508 829 aa20.31■□□□□ 0.84
TSKU-202ENST00000525167 NOVP48745 357 aa20.31■□□□□ 0.84
TSKU-202ENST00000525167 PSRC1Q6PGN9 363 aaPredicted RBP20.31■□□□□ 0.84
TSKU-202ENST00000525167 AGBL1Q96MI9 1066 aa20.31■□□□□ 0.84
TSKU-202ENST00000525167 TRERF1Q96PN7 1200 aa20.31■□□□□ 0.84
TSKU-202ENST00000525167 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.31■□□□□ 0.846e-7■■□□□ 13.2
TSKU-202ENST00000525167 ANAPC4Q9UJX5 808 aa20.31■□□□□ 0.84
TSKU-202ENST00000525167 PCDHB15Q9Y5E8 787 aa20.31■□□□□ 0.84
TSKU-202ENST00000525167 SOWAHBA6NEL2 793 aa20.3■□□□□ 0.84
TSKU-202ENST00000525167 IRX5P78411 483 aaPredicted RBP20.3■□□□□ 0.84
TSKU-202ENST00000525167 RASIP1Q5U651 963 aa20.3■□□□□ 0.84
TSKU-202ENST00000525167 SLC43A3Q8NBI5 491 aa20.3■□□□□ 0.84
TSKU-202ENST00000525167 GNEQ9Y223 722 aaKnown RBP20.3■□□□□ 0.84
TSKU-202ENST00000525167 Q9Y3F1 56 aa20.3■□□□□ 0.84
TSKU-202ENST00000525167 SALL3Q9BXA9 1300 aa20.29■□□□□ 0.84
TSKU-202ENST00000525167 FOXP2O15409 715 aa20.29■□□□□ 0.84
TSKU-202ENST00000525167 ORC4O43929 436 aa20.29■□□□□ 0.84
TSKU-202ENST00000525167 CD4P01730 458 aa20.29■□□□□ 0.84
TSKU-202ENST00000525167 ALAS1P13196 640 aa20.29■□□□□ 0.84
TSKU-202ENST00000525167 TMEM240Q5SV17 173 aa20.29■□□□□ 0.84
TSKU-202ENST00000525167 TLK2Q86UE8 772 aa20.29■□□□□ 0.84
TSKU-202ENST00000525167 TICAM2Q86XR7 235 aa20.29■□□□□ 0.84
TSKU-202ENST00000525167 OTUD7AQ8TE49 926 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms