RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 ANKRD23Q86SG2 305 aa18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 FBXO11Q86XK2 927 aa18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 AMNQ9BXJ7 453 aa18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 ASCC2Q9H1I8 757 aaPredicted RBP18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 BARHL2Q9NY43 387 aa18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 VPS54Q9P1Q0 977 aa18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 SLC45A1Q9Y2W3 748 aa18.27■□□□□ 0.52
TSPAN4-213ENST00000524895 BAZ2BQ9UIF8 2168 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 RASSF10A6NK89 507 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 SPDYE16A6NNV3 312 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 BTBD19C9JJ37 291 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 PDHXO00330 501 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 VWA5AO00534 786 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 STX6O43752 255 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 PPP1R11O60927 126 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 PDIA4P13667 645 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 NAPAP54920 295 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 GUCY1B3Q02153 619 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 TRAF1Q13077 416 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 DEFB115Q30KQ5 88 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 CYP4F22Q6NT55 531 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 CCDC148Q8NFR7 591 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 CCDC12Q8WUD4 166 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 SLC38A10Q9HBR0 1119 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 SH3GLB2Q9NR46 395 aa18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 CIZ1Q9ULV3 898 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-213ENST00000524895 RLFQ13129 1914 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 TESPA1A2RU30 521 aaPredicted RBP18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 STXBP3O00186 592 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 SREBF2Q12772 1141 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 USH1GQ495M9 461 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 KRT40Q6A162 431 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 PPP1R18Q6NYC8 613 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 FBXO18Q8NFZ0 1043 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 GJB4Q9NTQ9 266 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 PCDHA1Q9Y5I3 950 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 A0A0G2JMZ2 1700 aa18.25■□□□□ 0.51
TSPAN4-213ENST00000524895 ICAM1P05362 532 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 INHBEP58166 350 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 HERVK_113P62684 666 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 NUCB2P80303 420 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 OTUD7BQ6GQQ9 843 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 CPXCR1Q8N123 301 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 FAM177A1Q8N128 213 aaPredicted RBP18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 FAM43AQ8N2R8 423 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 RGS22Q8NE09 1264 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 COA7Q96BR5 231 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 CAPNS2Q96L46 248 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 P2RX7Q99572 595 aaKnown RBP18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 CHMP5Q9NZZ3 219 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 PNMA2Q9UL42 364 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 CCPG1Q9ULG6 757 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 ADAMTS5Q9UNA0 930 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 KCNJ14Q9UNX9 436 aa18.24■□□□□ 0.51
TSPAN4-213ENST00000524895 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 OAZ1P54368 228 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 NLRP5P59047 1200 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 NOGQ13253 232 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 PKP1Q13835 747 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 SAFBQ15424 915 aaKnown RBP eCLIP18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 LBX2Q6XYB7 198 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 MB21D1Q8N884 522 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 SMCR8Q8TEV9 937 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 GTF3C2Q8WUA4 911 aaPredicted RBP18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 PARK7Q99497 189 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 PTPN18Q99952 460 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 RAVER2Q9HCJ3 691 aaKnown RBP18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 BRMS1Q9HCU9 246 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 MTMR6Q9Y217 621 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 ZNF536O15090 1300 aa18.23■□□□□ 0.51
TSPAN4-213ENST00000524895 MMP1P03956 469 aa18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 CYP2C8P10632 490 aa18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 CALML3P27482 149 aa18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 GNL2Q13823 731 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 TYW1BQ6NUM6 668 aa18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 REPS2Q8NFH8 660 aa18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 SHISA4Q96DD7 197 aa18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 AGBL1Q96MI9 1066 aa18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 PHF20Q9BVI0 1012 aa18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 ZCCHC17Q9NP64 241 aaKnown RBP18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 ABCB11O95342 1321 aa18.22■□□□□ 0.51
TSPAN4-213ENST00000524895 COL11A1P12107 1806 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 IGF2BP3O00425 579 aaKnown RBP eCLIP18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 ZSCAN22P10073 491 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 TAL1P17542 331 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 KIF23Q02241 960 aaPredicted RBP18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 PLS1Q14651 629 aa18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 TMEM132BQ14DG7 1078 aa18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 MCTP1Q6DN14 999 aa18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 SNRNP48Q6IEG0 339 aaKnown RBP18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 PAGR1Q9BTK6 254 aa18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 TEX13BQ9BXU2 312 aa18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 C6orf50Q9HD87 102 aa18.21■□□□□ 0.51
TSPAN4-213ENST00000524895 ESYT2A0FGR8 921 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 SMCO2A6NFE2 343 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 ATP2A1O14983 1001 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 BRD1O95696 1058 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 ALAS1P13196 640 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 GNA11P29992 359 aa18.2■□□□□ 0.5
TSPAN4-213ENST00000524895 KRT2P35908 639 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms