RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 PCDHA4Q9UN74 947 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 UTYO14607 1347 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 EEF2P13639 858 aaKnown RBP18.95■□□□□ 0.62
BEST1-203ENST00000524877 RNF34Q969K3 372 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 NOX5Q96PH1 765 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 ZFYVE28Q9HCC9 887 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 COMMD10Q9Y6G5 202 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 YWHAEP62258 255 aaKnown RBP18.95■□□□□ 0.62
BEST1-203ENST00000524877 UBXN2AP68543 259 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 FAM83BQ5T0W9 1011 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 UBXN4Q92575 508 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 MAP4K1Q92918 833 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 PCDHB13Q9Y5F0 798 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 EXOC3O60645 756 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 DMP1Q13316 513 aaPredicted RBP18.95■□□□□ 0.62
BEST1-203ENST00000524877 MTX1Q13505 466 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 GPBP1Q86WP2 473 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 ADGRB1O14514 1584 aa18.95■□□□□ 0.62
BEST1-203ENST00000524877 KRT222Q8N1A0 295 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 SUDS3Q9H7L9 328 aaPredicted RBP18.94■□□□□ 0.62
BEST1-203ENST00000524877 CYP2D7A0A087X1C5 515 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 GOLGA6L9A6NEM1 432 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 TECP42680 631 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 SMC1AQ14683 1233 aaKnown RBP18.94■□□□□ 0.62
BEST1-203ENST00000524877 HSP90AA4PQ58FG1 418 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 NOSTRINQ8IVI9 506 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 KCNH4Q9UQ05 1017 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 SNAPC2Q13487 334 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 RAPGEF1Q13905 1077 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 RAET1EQ8TD07 263 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 LMBR1Q8WVP7 490 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 MMP19Q99542 508 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 POLR2DO15514 142 aaKnown RBP18.94■□□□□ 0.62
BEST1-203ENST00000524877 CELF2O95319 508 aaKnown RBP18.94■□□□□ 0.62
BEST1-203ENST00000524877 ANGEL2Q5VTE6 544 aaKnown RBP18.94■□□□□ 0.62
BEST1-203ENST00000524877 GGA3Q9NZ52 723 aa18.94■□□□□ 0.62
BEST1-203ENST00000524877 JAK2O60674 1132 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 ARID5AQ03989 594 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 PPP2R5AQ15172 486 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 RPS6KC1Q96S38 1066 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 LSG1Q9H089 658 aaKnown RBP18.93■□□□□ 0.62
BEST1-203ENST00000524877 PNMA6FA0A0J9YX94 578 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 ABCC12Q96J65 1359 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 CYP2E1P05181 493 aaPredicted RBP18.93■□□□□ 0.62
BEST1-203ENST00000524877 ZSCAN20P17040 1043 aaPredicted RBP18.93■□□□□ 0.62
BEST1-203ENST00000524877 ODR4Q5SWX8 454 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 RNF26Q9BY78 433 aaPredicted RBP18.93■□□□□ 0.62
BEST1-203ENST00000524877 WDR11Q9BZH6 1224 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 TBC1D7Q9P0N9 293 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 MEGF6O75095 1541 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 SSX2IPQ9Y2D8 614 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 USP17L15C9J2P7 530 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 USP17L13C9JLJ4 530 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 USP17L11C9JVI0 530 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 USP17L18D6R9N7 530 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 USP17L22D6RA61 530 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 USP17L17D6RBQ6 530 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 USP17L19D6RCP7 530 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 USP17L20D6RJB6 530 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 USP17L24Q0WX57 530 aa18.93■□□□□ 0.62
BEST1-203ENST00000524877 ADD1P35611 737 aaKnown RBP18.92■□□□□ 0.62
BEST1-203ENST00000524877 ECE1P42892 770 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 RAD51AP2Q09MP3 1159 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 EEPD1Q7L9B9 569 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 SLC17A8Q8NDX2 589 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 AGBL3Q8NEM8 1001 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 PRIMPOLQ96LW4 560 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 NAA15Q9BXJ9 866 aaKnown RBP18.92■□□□□ 0.62
BEST1-203ENST00000524877 MYOZ2Q9NPC6 264 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 IVLP07476 585 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 SPP2Q13103 211 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 PARK7Q99497 189 aaKnown RBP18.92■□□□□ 0.62
BEST1-203ENST00000524877 ZBTB24O43167 697 aaPredicted RBP18.92■□□□□ 0.62
BEST1-203ENST00000524877 IGSF3O75054 1194 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 ZNF589Q86UQ0 364 aaPredicted RBP18.92■□□□□ 0.62
BEST1-203ENST00000524877 FAM200AQ8TCP9 573 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 STRBPQ96SI9 672 aaKnown RBP18.92■□□□□ 0.62
BEST1-203ENST00000524877 NOC4LQ9BVI4 516 aaKnown RBP18.92■□□□□ 0.62
BEST1-203ENST00000524877 BCCIPQ9P287 314 aaKnown RBP eCLIP18.92■□□□□ 0.62
BEST1-203ENST00000524877 ME3Q16798 604 aa18.92■□□□□ 0.62
BEST1-203ENST00000524877 TNNC2P02585 160 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 GCFC2P16383 781 aaKnown RBP18.91■□□□□ 0.62
BEST1-203ENST00000524877 TAF1CQ15572 869 aaPredicted RBP18.91■□□□□ 0.62
BEST1-203ENST00000524877 ZNF70Q9UC06 446 aaPredicted RBP18.91■□□□□ 0.62
BEST1-203ENST00000524877 PSAPP07602 524 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 ZSCAN23Q3MJ62 389 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 SNRNP48Q6IEG0 339 aaKnown RBP18.91■□□□□ 0.62
BEST1-203ENST00000524877 GIMAP8Q8ND71 665 aaPredicted RBP18.91■□□□□ 0.62
BEST1-203ENST00000524877 MYCBPQ99417 103 aaPredicted RBP18.91■□□□□ 0.62
BEST1-203ENST00000524877 CD2APQ9Y5K6 639 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 K7ENM7 598 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 PTPN14Q15678 1187 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 GJC1P36383 396 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 SPECC1Q5M775 1068 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 DNAJC25Q9H1X3 360 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 SNAP23O00161 211 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 FDX1P10109 184 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 GNAT1P11488 350 aa18.91■□□□□ 0.62
BEST1-203ENST00000524877 PDIA3P30101 505 aaKnown RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms