RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 MOXD2PA6NHM9 499 aa19.29■□□□□ 0.68
HIF3A-208ENST00000524533 DUSP11O75319 330 aaKnown RBP19.29■□□□□ 0.68
HIF3A-208ENST00000524533 CTDSPL2Q05D32 466 aa19.29■□□□□ 0.68
HIF3A-208ENST00000524533 ZNF697Q5TEC3 545 aa19.29■□□□□ 0.68
HIF3A-208ENST00000524533 ANKRD45Q5TZF3 282 aa19.29■□□□□ 0.68
HIF3A-208ENST00000524533 ARMCX2Q7L311 632 aa19.29■□□□□ 0.68
HIF3A-208ENST00000524533 CHURC1Q8WUH1 139 aa19.29■□□□□ 0.68
HIF3A-208ENST00000524533 CHMP4CQ96CF2 233 aa19.29■□□□□ 0.68
HIF3A-208ENST00000524533 FAM161BQ96MY7 647 aa19.29■□□□□ 0.68
HIF3A-208ENST00000524533 ABHD16BQ9H3Z7 469 aa19.29■□□□□ 0.68
HIF3A-208ENST00000524533 DLL1O00548 723 aa19.28■□□□□ 0.68
HIF3A-208ENST00000524533 RAG1P15918 1043 aa19.28■□□□□ 0.68
HIF3A-208ENST00000524533 CCDC144BQ3MJ40 725 aa19.28■□□□□ 0.68
HIF3A-208ENST00000524533 KLHDC9Q8NEP7 349 aa19.28■□□□□ 0.68
HIF3A-208ENST00000524533 STAG1Q8WVM7 1258 aa19.28■□□□□ 0.68
HIF3A-208ENST00000524533 EVI5LQ96CN4 794 aa19.28■□□□□ 0.68
HIF3A-208ENST00000524533 GUCD1Q96NT3 240 aa19.28■□□□□ 0.68
HIF3A-208ENST00000524533 RNF146Q9NTX7 359 aa19.28■□□□□ 0.68
HIF3A-208ENST00000524533 MYADML2A6NDP7 307 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 KIAA0355O15063 1070 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 ADCY6O43306 1168 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 C6orf222P0C671 652 aaPredicted RBP19.27■□□□□ 0.68
HIF3A-208ENST00000524533 MCCP23508 829 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 ITGB8P26012 769 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 CST5P28325 142 aaPredicted RBP19.27■□□□□ 0.68
HIF3A-208ENST00000524533 KCNA10Q16322 511 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 VPS53Q5VIR6 699 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 ANKRD33Q7Z3H0 272 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 CCDC144CPQ8IYA2 1237 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 AGBL1Q96MI9 1066 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 CRBNQ96SW2 442 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 SPC25Q9HBM1 224 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 TMEM39AQ9NV64 488 aa19.27■□□□□ 0.68
HIF3A-208ENST00000524533 ZNF536O15090 1300 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 DCDC2CA8MYV0 355 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 RANBP6O60518 1105 aaKnown RBP19.26■□□□□ 0.67
HIF3A-208ENST00000524533 NMT2O60551 498 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 CNTN2Q02246 1040 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 TKFCQ3LXA3 575 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 CCSAPQ6IQ19 270 aaPredicted RBP19.26■□□□□ 0.67
HIF3A-208ENST00000524533 KCTD1Q719H9 257 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 RASGRP2Q7LDG7 609 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 PCSK9Q8NBP7 692 aaKnown RBP19.26■□□□□ 0.67
HIF3A-208ENST00000524533 GLT1D1Q96MS3 346 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 TOX2Q96NM4 488 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 UPF3AQ9H1J1 476 aaKnown RBP19.26■□□□□ 0.67
HIF3A-208ENST00000524533 A1CFQ9NQ94 594 aaKnown RBP19.26■□□□□ 0.67
HIF3A-208ENST00000524533 INCENPQ9NQS7 918 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 ANAPC4Q9UJX5 808 aa19.26■□□□□ 0.67
HIF3A-208ENST00000524533 PLA2G6O60733 806 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 ALAS1P13196 640 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 GJA9P57773 515 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 FPGSQ05932 587 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 FAAP100Q0VG06 881 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 RCSD1Q6JBY9 416 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 CCDC174Q6PII3 467 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 FAM133AQ8N9E0 248 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 TRERF1Q96PN7 1200 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 IL17RBQ9NRM6 502 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 HELLSQ9NRZ9 838 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 ELP1O95163 1332 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 MROH7Q68CQ1 1323 aa19.25■□□□□ 0.67
HIF3A-208ENST00000524533 ORC4O43929 436 aa19.24■□□□□ 0.67
HIF3A-208ENST00000524533 ASGR1P07306 291 aa19.24■□□□□ 0.67
HIF3A-208ENST00000524533 PDE1AP54750 535 aa19.24■□□□□ 0.67
HIF3A-208ENST00000524533 IRX5P78411 483 aaPredicted RBP19.24■□□□□ 0.67
HIF3A-208ENST00000524533 SMAD3P84022 425 aaKnown RBP19.24■□□□□ 0.67
HIF3A-208ENST00000524533 CCDC96Q2M329 555 aa19.24■□□□□ 0.67
HIF3A-208ENST00000524533 RNPC3Q96LT9 517 aaKnown RBP19.24■□□□□ 0.67
HIF3A-208ENST00000524533 KATNBL1Q9H079 304 aa19.24■□□□□ 0.67
HIF3A-208ENST00000524533 PRR12Q9ULL5 1215 aa19.24■□□□□ 0.67
HIF3A-208ENST00000524533 MTMR7Q9Y216 660 aa19.24■□□□□ 0.67
HIF3A-208ENST00000524533 LCTP09848 1927 aa19.23■□□□□ 0.67
HIF3A-208ENST00000524533 ASB14A6NK59 587 aa19.23■□□□□ 0.67
HIF3A-208ENST00000524533 EPHB4P54760 987 aa19.23■□□□□ 0.67
HIF3A-208ENST00000524533 SNAP25P60880 206 aa19.23■□□□□ 0.67
HIF3A-208ENST00000524533 HDAC1Q13547 482 aaPredicted RBP19.23■□□□□ 0.67
HIF3A-208ENST00000524533 GNASQ5JWF2 1037 aa19.23■□□□□ 0.67
HIF3A-208ENST00000524533 TOMM22Q9NS69 142 aa19.23■□□□□ 0.67
HIF3A-208ENST00000524533 A0A0D9SFI3 127 aa19.22■□□□□ 0.67
HIF3A-208ENST00000524533 A0A0U1RQG5 324 aaPredicted RBP19.22■□□□□ 0.67
HIF3A-208ENST00000524533 SOWAHBA6NEL2 793 aa19.22■□□□□ 0.67
HIF3A-208ENST00000524533 ALX1Q15699 326 aa19.22■□□□□ 0.67
HIF3A-208ENST00000524533 DCAF4Q8WV16 495 aa19.22■□□□□ 0.67
HIF3A-208ENST00000524533 VTI1AQ96AJ9 217 aa19.22■□□□□ 0.67
HIF3A-208ENST00000524533 FAM227BQ96M60 508 aa19.22■□□□□ 0.67
HIF3A-208ENST00000524533 TBX21Q9UL17 535 aa19.22■□□□□ 0.67
HIF3A-208ENST00000524533 CCPG1Q9ULG6 757 aa19.22■□□□□ 0.67
HIF3A-208ENST00000524533 A0A0C4DFX4 3053 aa19.21■□□□□ 0.67
HIF3A-208ENST00000524533 NOVP48745 357 aa19.21■□□□□ 0.67
HIF3A-208ENST00000524533 TNFAIP2Q03169 654 aa19.21■□□□□ 0.67
HIF3A-208ENST00000524533 MCMDC2Q4G0Z9 681 aa19.21■□□□□ 0.67
HIF3A-208ENST00000524533 MUM1L1Q5H9M0 696 aa19.21■□□□□ 0.67
HIF3A-208ENST00000524533 RRP12Q5JTH9 1297 aaKnown RBP19.21■□□□□ 0.67
HIF3A-208ENST00000524533 NOL8Q76FK4 1167 aaKnown RBP19.21■□□□□ 0.67
HIF3A-208ENST00000524533 SEMA6BQ9H3T3 888 aa19.21■□□□□ 0.67
HIF3A-208ENST00000524533 CYP39A1Q9NYL5 469 aa19.21■□□□□ 0.67
HIF3A-208ENST00000524533 ZMYM6O95789 1325 aa19.21■□□□□ 0.67
HIF3A-208ENST00000524533 UNC80Q8N2C7 3258 aa19.2■□□□□ 0.66
HIF3A-208ENST00000524533 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms