RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 LRRC37AA6NMS7 1700 aa8.7□□□□□ -1.02
CTR9-202ENST00000524523 KIAA1551Q9HCM1 1747 aa8.7□□□□□ -1.02
CTR9-202ENST00000524523 FIBPO43427 364 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 MAN1A2O60476 641 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 RANBP6O60518 1105 aaKnown RBP8.69□□□□□ -1.02
CTR9-202ENST00000524523 PPP6R2O75170 966 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 GADD45BO75293 160 aaPredicted RBP8.69□□□□□ -1.02
CTR9-202ENST00000524523 BMP15O95972 392 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 ADH1AP07327 375 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 CDC27P30260 824 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 SOX11P35716 441 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 RHBDL3P58872 404 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 RELBQ01201 579 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 AKAP17AQ02040 695 aaKnown RBP8.69□□□□□ -1.02
CTR9-202ENST00000524523 KIF23Q02241 960 aaPredicted RBP8.69□□□□□ -1.02
CTR9-202ENST00000524523 SEMA3FQ13275 785 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 GALNT17Q6IS24 598 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 C16orf86Q6ZW13 317 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 FERMT3Q86UX7 667 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 GAS2L3Q86XJ1 694 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 ELOA2Q8IYF1 753 aaPredicted RBP8.69□□□□□ -1.02
CTR9-202ENST00000524523 ZNF444Q8N0Y2 327 aaPredicted RBP8.69□□□□□ -1.02
CTR9-202ENST00000524523 C7orf43Q8WVR3 580 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 AGBL1Q96MI9 1066 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 SH3GLB2Q9NR46 395 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 MCM9Q9NXL9 1143 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 PCDHB11Q9Y5F2 797 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 TNKSO95271 1327 aa8.69□□□□□ -1.02
CTR9-202ENST00000524523 MAST2Q6P0Q8 1798 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 SPINT1O43278 529 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 SLC39A14Q15043 492 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 RILPL1Q5EBL4 403 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 RRP12Q5JTH9 1297 aaKnown RBP8.68□□□□□ -1.02
CTR9-202ENST00000524523 SOGA3Q5TF21 947 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 KRT40Q6A162 431 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 NBPF11Q86T75 865 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 MICU3Q86XE3 530 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 C2CD5Q86YS7 1000 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 RTKN2Q8IZC4 609 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 LINC00301Q8NCQ3 95 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 POM121Q96HA1 1249 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 PPP1R9BQ96SB3 815 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 DHX36Q9H2U1 1008 aaKnown RBP8.68□□□□□ -1.02
CTR9-202ENST00000524523 TSPY26PQ9H489 355 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 MKNK2Q9HBH9 465 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 SWAP70Q9UH65 585 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 CEP131Q9UPN4 1083 aa8.68□□□□□ -1.02
CTR9-202ENST00000524523 FAM237AA0A1B0GTK4 181 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 TSPY2A6NKD2 308 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 TTLL8A6PVC2 850 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 MMP1P03956 469 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 POLR3DP05423 398 aaPredicted RBP8.67□□□□□ -1.02
CTR9-202ENST00000524523 CCDC192P0DO97 292 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 CMA1P23946 247 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 BTDP43251 543 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 ERVK-9P63128 1117 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 CCDC173Q0VFZ6 552 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 LTBP1Q14766 1721 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 QSER1Q2KHR3 1735 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 CASZ1Q86V15 1759 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 TEX11Q8IYF3 940 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 NEDD1Q8NHV4 660 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 CTCFLQ8NI51 663 aaPredicted RBP8.67□□□□□ -1.02
CTR9-202ENST00000524523 SH3RF3Q8TEJ3 882 aaPredicted RBP8.67□□□□□ -1.02
CTR9-202ENST00000524523 CCDC17Q96LX7 622 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 ZDHHC15Q96MV8 337 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 TIGD1Q96MW7 591 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 PSMD1Q99460 953 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 EHD4Q9H223 541 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 INCENPQ9NQS7 918 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 TFIP11Q9UBB9 837 aaKnown RBP8.67□□□□□ -1.02
CTR9-202ENST00000524523 SERPINA10Q9UK55 444 aa8.67□□□□□ -1.02
CTR9-202ENST00000524523 C10orf71Q711Q0 1435 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 SYCE3A1L190 88 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 SPTLC2O15270 562 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 CALML3P27482 149 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 PTGIRP43119 386 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 TRAPPC10P48553 1259 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 GTF2IP78347 998 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 TFAP4Q01664 338 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 FAM160A1Q05DH4 1040 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 GABPAQ06546 454 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 KIAA2012Q0VF49 1180 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 MAP3K11Q16584 847 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 ANO1Q5XXA6 986 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 RCSD1Q6JBY9 416 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 CCDC73Q6ZRK6 1079 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 TMTC3Q6ZXV5 915 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 NOSTRINQ8IVI9 506 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 TEX2Q8IWB9 1127 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 TGFBRAP1Q8WUH2 860 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 TEKT1Q969V4 418 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 PGBD1Q96JS3 809 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 USP28Q96RU2 1077 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 FUCA2Q9BTY2 467 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 IDI2Q9BXS1 227 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 SLC26A6Q9BXS9 759 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 NUP62CLQ9H1M0 184 aa8.66□□□□□ -1.02
CTR9-202ENST00000524523 CLSTN2Q9H4D0 955 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms