RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.93□□□□□ -1.62
CSMD1-214ENST00000524177 VWCEQ96DN2 955 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 FGD4Q96M96 766 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 DUSP23Q9BVJ7 150 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 TMX1Q9H3N1 280 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 MKNK2Q9HBH9 465 aa4.93□□□□□ -1.62
CSMD1-214ENST00000524177 TMEM265A0A087WTH1 108 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 RBAK-RBAKDNI3L0D1 243 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 TBX1O43435 398 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 ITGAVP06756 1048 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 NAT2P11245 290 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 L1CAMP32004 1257 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 PPP2R2AP63151 447 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 TM4SF20Q53R12 229 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 ZC3H12BQ5HYM0 836 aaKnown RBP4.92□□□□□ -1.62
CSMD1-214ENST00000524177 FAM209AQ5JX71 171 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 NBPF12Q5TAG4 269 aaPredicted RBP4.92□□□□□ -1.62
CSMD1-214ENST00000524177 HEATR6Q6AI08 1181 aaKnown RBP4.92□□□□□ -1.62
CSMD1-214ENST00000524177 LILRA6Q6PI73 481 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 LCNL1Q6ZST4 164 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 CCDC144CPQ8IYA2 1237 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 ZSCAN18Q8TBC5 510 aaPredicted RBP4.92□□□□□ -1.62
CSMD1-214ENST00000524177 LIN37Q96GY3 246 aaPredicted RBP4.92□□□□□ -1.62
CSMD1-214ENST00000524177 KREMEN1Q96MU8 473 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 MIPEPQ99797 713 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 AARSD1Q9BTE6 412 aaKnown RBP4.92□□□□□ -1.62
CSMD1-214ENST00000524177 NCOA5Q9HCD5 579 aaKnown RBP4.92□□□□□ -1.62
CSMD1-214ENST00000524177 FAM53CQ9NYF3 392 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 PCOLCE2Q9UKZ9 415 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 MRPS23Q9Y3D9 190 aaKnown RBP4.92□□□□□ -1.62
CSMD1-214ENST00000524177 ZNF451Q9Y4E5 1061 aa4.92□□□□□ -1.62
CSMD1-214ENST00000524177 TRAV20A0A0B4J274 112 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-214ENST00000524177 AGRPO00253 132 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 SLITRK5O94991 958 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 TSPAN15O95858 294 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 GRIA2P42262 883 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 ANAPC15P60006 121 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 PABPC4Q13310 644 aaKnown RBP eCLIP4.91□□□□□ -1.62
CSMD1-214ENST00000524177 TAF7LQ5H9L4 462 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 LETMD1Q6P1Q0 360 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 THNSL2Q86YJ6 484 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 LRRC56Q8IYG6 542 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-214ENST00000524177 C7orf61Q8IZ16 206 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 TOP6BLQ8N6T0 577 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 MFSD2AQ8NA29 543 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 NINJ1Q92982 152 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 MFSD3Q96ES6 412 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 FAM126AQ9BYI3 521 aaPredicted RBP4.91□□□□□ -1.62
CSMD1-214ENST00000524177 MKRN2Q9H000 416 aaKnown RBP4.91□□□□□ -1.62
CSMD1-214ENST00000524177 SSU72Q9NP77 194 aaKnown RBP4.91□□□□□ -1.62
CSMD1-214ENST00000524177 NCANO14594 1321 aa4.91□□□□□ -1.62
CSMD1-214ENST00000524177 TRBV23-1A0A0A0MS06 115 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 CCDC163A0A0D9SF12 145 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 IRS4O14654 1257 aaPredicted RBP4.9□□□□□ -1.63
CSMD1-214ENST00000524177 RFPL3O75679 317 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 POU3F3P20264 500 aaPredicted RBP4.9□□□□□ -1.63
CSMD1-214ENST00000524177 CD247P20963 164 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 RNF4P78317 190 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 HSP90AA2PQ14568 343 aaPredicted RBP4.9□□□□□ -1.63
CSMD1-214ENST00000524177 ANKRD39Q53RE8 183 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 KRT26Q7Z3Y9 468 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 CDH24Q86UP0 819 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 DHX37Q8IY37 1157 aaKnown RBP4.9□□□□□ -1.63
CSMD1-214ENST00000524177 NIM1KQ8IY84 436 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 RIN3Q8TB24 985 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 STAG1Q8WVM7 1258 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 OSBP2Q969R2 916 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 MRGPRX3Q96LB0 322 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 PPP1R16BQ96T49 567 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 APBA2Q99767 749 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 GBP3Q9H0R5 595 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 GP6Q9HCN6 339 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 LMCD1Q9NZU5 365 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 WHRNQ9P202 907 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 KLHL42Q9P2K6 505 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 CEP131Q9UPN4 1083 aa4.9□□□□□ -1.63
CSMD1-214ENST00000524177 A0A087X0B3 334 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 B8ZZF3 427 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 PRRG2O14669 202 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 PLD2O14939 933 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 KCNQ2O43526 872 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 RAPGEF3O95398 923 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 ZSCAN22P10073 491 aaPredicted RBP4.89□□□□□ -1.63
CSMD1-214ENST00000524177 FGFR1P11362 822 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 STAT3P40763 770 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 ZP2Q05996 745 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 IKZF1Q13422 519 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 SNW1Q13573 536 aaKnown RBP4.89□□□□□ -1.63
CSMD1-214ENST00000524177 AUHQ13825 339 aaKnown RBP4.89□□□□□ -1.63
CSMD1-214ENST00000524177 FYB2Q5VWT5 728 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 PRR23BQ6ZRT6 265 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 SYDE1Q6ZW31 735 aaPredicted RBP4.89□□□□□ -1.63
CSMD1-214ENST00000524177 ANKLE2Q86XL3 938 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 TRIM59Q8IWR1 403 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 BVESQ8NE79 360 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 ADCY4Q8NFM4 1077 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 RNF141Q8WVD5 230 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 PPP1R14AQ96A00 147 aa4.89□□□□□ -1.63
CSMD1-214ENST00000524177 HEXIM2Q96MH2 286 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms