RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 PRDM16Q9HAZ2 1276 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 CRTAC1Q9NQ79 661 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 SAMD15Q9P1V8 674 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
PFDN1-207ENST00000524074 TNKSO95271 1327 aa11.29□□□□□ -0.6
PFDN1-207ENST00000524074 IGF1RP08069 1367 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 LRIG2O94898 1065 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 ABLIM3O94929 683 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 PTPN21Q16825 1174 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 SKOR2Q2VWA4 1001 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-207ENST00000524074 ARMCX6Q7L4S7 300 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 KIF18BQ86Y91 864 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
PFDN1-207ENST00000524074 DCAF4Q8WV16 495 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 ORAI3Q9BRQ5 295 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 ZNF700Q9H0M5 742 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 CYP4F12Q9HCS2 524 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 GMPR2Q9P2T1 348 aaKnown RBP11.28□□□□□ -0.6
PFDN1-207ENST00000524074 CEP131Q9UPN4 1083 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 PCDHA9Q9Y5H5 950 aa11.28□□□□□ -0.6
PFDN1-207ENST00000524074 M0R2C6 588 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 U2AF1L5P0DN76 240 aaPredicted RBP11.27□□□□□ -0.61
PFDN1-207ENST00000524074 SNRPBP14678 240 aaKnown RBP11.27□□□□□ -0.61
PFDN1-207ENST00000524074 U2AF1Q01081 240 aaKnown RBP eCLIP11.27□□□□□ -0.61
PFDN1-207ENST00000524074 GUCY1A3Q02108 690 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 C4orf46Q504U0 113 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 SLC35F1Q5T1Q4 408 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 STYK1Q6J9G0 422 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 CXorf57Q6NSI4 855 aaKnown RBP11.27□□□□□ -0.61
PFDN1-207ENST00000524074 DYMQ7RTS9 669 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 DGKHQ86XP1 1220 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.27□□□□□ -0.61
PFDN1-207ENST00000524074 FIBCD1Q8N539 461 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 MENTQ9BUN1 341 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 RHOBTB2Q9BYZ6 727 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 CHST12Q9NRB3 414 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 IP6K2Q9UHH9 426 aa11.27□□□□□ -0.61
PFDN1-207ENST00000524074 ZNF891A8MT65 544 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-207ENST00000524074 PRPF3O43395 683 aaKnown RBP11.26□□□□□ -0.61
PFDN1-207ENST00000524074 PRKD3O94806 890 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 SCG5P05408 212 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 AMPD2Q01433 879 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 VPS72Q15906 364 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 PRSS53Q2L4Q9 553 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 ABCB5Q2M3G0 1257 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 LONRF3Q496Y0 759 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 MTDHQ86UE4 582 aaKnown RBP11.26□□□□□ -0.61
PFDN1-207ENST00000524074 DNAJB8Q8NHS0 232 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 SLC39A13Q96H72 371 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 C1orf159Q96HA4 380 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 ASPNQ9BXN1 380 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 CYP26B1Q9NR63 512 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 GPR55Q9Y2T6 319 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-207ENST00000524074 ASXL2Q76L83 1435 aa11.26□□□□□ -0.61
PFDN1-207ENST00000524074 GAS7O60861 476 aa11.25□□□□□ -0.61
PFDN1-207ENST00000524074 CHSY3Q70JA7 882 aa11.25□□□□□ -0.61
PFDN1-207ENST00000524074 APBB1IPQ7Z5R6 666 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-207ENST00000524074 NXPE1Q8N323 547 aa11.25□□□□□ -0.61
PFDN1-207ENST00000524074 VWCEQ96DN2 955 aa11.25□□□□□ -0.61
PFDN1-207ENST00000524074 ZDHHC15Q96MV8 337 aa11.25□□□□□ -0.61
PFDN1-207ENST00000524074 PRDM6Q9NQX0 595 aa11.25□□□□□ -0.61
PFDN1-207ENST00000524074 LUC7L2Q9Y383 392 aaKnown RBP11.25□□□□□ -0.61
PFDN1-207ENST00000524074 SF3B6Q9Y3B4 125 aaKnown RBP11.25□□□□□ -0.61
PFDN1-207ENST00000524074 MEGF11A6BM72 1044 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 DEAF1O75398 565 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-207ENST00000524074 FKBP9O95302 570 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 CCND1P24385 295 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 ETV3P41162 512 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 ADCYAP1R1P41586 468 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 ASPAP45381 313 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-207ENST00000524074 TCIRG1Q13488 830 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 FKBP9P1Q75LS8 142 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 SMYD4Q8IYR2 804 aaPredicted RBP11.24□□□□□ -0.61
PFDN1-207ENST00000524074 RNF208Q9H0X6 261 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 ZKSCAN5Q9Y2L8 839 aa11.24□□□□□ -0.61
PFDN1-207ENST00000524074 CBX4O00257 560 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 GLRX3O76003 335 aaKnown RBP11.23□□□□□ -0.61
PFDN1-207ENST00000524074 SNUPNO95149 360 aaKnown RBP11.23□□□□□ -0.61
PFDN1-207ENST00000524074 F2P00734 622 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 MYBL2P10244 700 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 ITIH2P19823 946 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 DTWD1Q8N5C7 304 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 SMG8Q8ND04 991 aaKnown RBP11.23□□□□□ -0.61
PFDN1-207ENST00000524074 SVIPQ8NHG7 77 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 RNF141Q8WVD5 230 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 IL17RAQ96F46 866 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 MIPEPQ99797 713 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 DSCC1Q9BVC3 393 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 SUGCTQ9HAC7 445 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 PRR13Q9NZ81 148 aa11.23□□□□□ -0.61
PFDN1-207ENST00000524074 VSTM5A8MXK1 200 aa11.22□□□□□ -0.61
PFDN1-207ENST00000524074 NACADO15069 1562 aa11.22□□□□□ -0.61
PFDN1-207ENST00000524074 VAMP4O75379 141 aa11.22□□□□□ -0.61
PFDN1-207ENST00000524074 FAPQ12884 760 aa11.22□□□□□ -0.61
PFDN1-207ENST00000524074 ATP13A4Q4VNC1 1196 aa11.22□□□□□ -0.61
PFDN1-207ENST00000524074 LETMD1Q6P1Q0 360 aa11.22□□□□□ -0.61
PFDN1-207ENST00000524074 KCNT2Q6UVM3 1135 aa11.22□□□□□ -0.61
PFDN1-207ENST00000524074 C11orf74Q86VG3 221 aa11.22□□□□□ -0.61
PFDN1-207ENST00000524074 SMC1BQ8NDV3 1235 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms