RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 SHHQ15465 462 aa22.28■■□□□ 1.16
PTP4A3-206ENST00000524028 CCSAPQ6IQ19 270 aaPredicted RBP22.28■■□□□ 1.16
PTP4A3-206ENST00000524028 KLHDC9Q8NEP7 349 aa22.28■■□□□ 1.16
PTP4A3-206ENST00000524028 HELLSQ9NRZ9 838 aa22.28■■□□□ 1.16
PTP4A3-206ENST00000524028 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.28■■□□□ 1.16
PTP4A3-206ENST00000524028 A0A0D9SFI3 127 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 MYADML2A6NDP7 307 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 POTEB2H3BUK9 544 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 FDX1P10109 184 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 NOVP48745 357 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 ACLYP53396 1101 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 SNAP25P60880 206 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 CNTN2Q02246 1040 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 ALX1Q15699 326 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 C9orf50Q5SZB4 431 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 KCTD1Q719H9 257 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 FAM160B2Q86V87 743 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 CHURC1Q8WUH1 139 aa22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 TSEN34Q9BSV6 310 aaKnown RBP22.27■■□□□ 1.16
PTP4A3-206ENST00000524028 RANBP6O60518 1105 aaKnown RBP22.26■■□□□ 1.15
PTP4A3-206ENST00000524028 FGRP09769 529 aa22.26■■□□□ 1.15
PTP4A3-206ENST00000524028 IKQ13123 557 aaPredicted RBP22.26■■□□□ 1.15
PTP4A3-206ENST00000524028 KCNA10Q16322 511 aa22.26■■□□□ 1.15
PTP4A3-206ENST00000524028 RCSD1Q6JBY9 416 aa22.26■■□□□ 1.15
PTP4A3-206ENST00000524028 ARMCX2Q7L311 632 aa22.26■■□□□ 1.15
PTP4A3-206ENST00000524028 SLC17A8Q8NDX2 589 aa22.26■■□□□ 1.15
PTP4A3-206ENST00000524028 KATNBL1Q9H079 304 aa22.26■■□□□ 1.15
PTP4A3-206ENST00000524028 ORC4O43929 436 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 PLA2G6O60733 806 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 PQBP1O60828 265 aaKnown RBP22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 DUSP11O75319 330 aaKnown RBP22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 FGAP02671 866 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 CCDC144BQ3MJ40 725 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 PPP4R3BQ5MIZ7 849 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 CCDC144CPQ8IYA2 1237 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 FAM133AQ8N9E0 248 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 ABHD16BQ9H3Z7 469 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 ACAD9Q9H845 621 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 A1CFQ9NQ94 594 aaKnown RBP22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 RNF146Q9NTX7 359 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 PRR12Q9ULL5 1215 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 STXBP5LQ9Y2K9 1186 aa22.25■■□□□ 1.15
PTP4A3-206ENST00000524028 SOWAHBA6NEL2 793 aa22.24■■□□□ 1.15
PTP4A3-206ENST00000524028 CLTBP09497 229 aa22.24■■□□□ 1.15
PTP4A3-206ENST00000524028 MCMDC2Q4G0Z9 681 aa22.24■■□□□ 1.15
PTP4A3-206ENST00000524028 CCDC174Q6PII3 467 aa22.24■■□□□ 1.15
PTP4A3-206ENST00000524028 ZNF589Q86UQ0 364 aaPredicted RBP22.24■■□□□ 1.15
PTP4A3-206ENST00000524028 LNPKQ9C0E8 428 aa22.24■■□□□ 1.15
PTP4A3-206ENST00000524028 MTMR7Q9Y216 660 aa22.24■■□□□ 1.15
PTP4A3-206ENST00000524028 MOXD2PA6NHM9 499 aa22.23■■□□□ 1.15
PTP4A3-206ENST00000524028 NMIQ13287 307 aaPredicted RBP22.23■■□□□ 1.15
PTP4A3-206ENST00000524028 MUM1L1Q5H9M0 696 aa22.23■■□□□ 1.15
PTP4A3-206ENST00000524028 FAM109BQ6ICB4 259 aaPredicted RBP22.23■■□□□ 1.15
PTP4A3-206ENST00000524028 TRERF1Q96PN7 1200 aa22.23■■□□□ 1.15
PTP4A3-206ENST00000524028 UPF3AQ9H1J1 476 aaKnown RBP22.23■■□□□ 1.15
PTP4A3-206ENST00000524028 STARD7Q9NQZ5 370 aa22.23■■□□□ 1.15
PTP4A3-206ENST00000524028 DDX49Q9Y6V7 483 aaKnown RBP22.23■■□□□ 1.15
PTP4A3-206ENST00000524028 KIAA0355O15063 1070 aa22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 HSPD1P10809 573 aaKnown RBP22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 ALAS1P13196 640 aa22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 CST5P28325 142 aaPredicted RBP22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 EPHB4P54760 987 aa22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 FAAP100Q0VG06 881 aa22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 ANKRD33Q7Z3H0 272 aa22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 NUP133Q8WUM0 1156 aa22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 ASTN1O14525 1302 aa22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 LAMA2P24043 3122 aaKnown RBP22.22■■□□□ 1.15
PTP4A3-206ENST00000524028 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 CTAGE5O15320 804 aa22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 C6orf222P0C671 652 aaPredicted RBP22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 GJA9P57773 515 aa22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 TKFCQ3LXA3 575 aa22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 TTBK2Q6IQ55 1244 aa22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 FAM161BQ96MY7 647 aa22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 TOX2Q96NM4 488 aa22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 GUCD1Q96NT3 240 aa22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 TOMM22Q9NS69 142 aa22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 TMEM39AQ9NV64 488 aa22.21■■□□□ 1.15
PTP4A3-206ENST00000524028 TRIM6-TRIM34B2RNG4 842 aa22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 ASGR1P07306 291 aa22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 RAG1P15918 1043 aa22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 SLC16A2P36021 539 aa22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 RRP12Q5JTH9 1297 aaKnown RBP22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 B4GALNT3Q6L9W6 998 aa22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 TICAM2Q86XR7 235 aa22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 SMC5Q8IY18 1101 aa22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 DCAF4Q8WV16 495 aa22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 YTHDC1Q96MU7 727 aaKnown RBP22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 TMEM47Q9BQJ4 181 aa22.2■■□□□ 1.14
PTP4A3-206ENST00000524028 IGHDP01880 384 aa22.19■■□□□ 1.14
PTP4A3-206ENST00000524028 CDK7P50613 346 aa22.19■■□□□ 1.14
PTP4A3-206ENST00000524028 HAND2P61296 217 aa22.19■■□□□ 1.14
PTP4A3-206ENST00000524028 CCDC96Q2M329 555 aa22.19■■□□□ 1.14
PTP4A3-206ENST00000524028 RILPL2Q969X0 211 aa22.19■■□□□ 1.14
PTP4A3-206ENST00000524028 PURBQ96QR8 312 aaKnown RBP22.19■■□□□ 1.14
PTP4A3-206ENST00000524028 TCP11L1Q9NUJ3 509 aa22.19■■□□□ 1.14
PTP4A3-206ENST00000524028 CYP39A1Q9NYL5 469 aa22.19■■□□□ 1.14
PTP4A3-206ENST00000524028 ELP1O95163 1332 aa22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 ZMYM6O95789 1325 aa22.18■■□□□ 1.14
PTP4A3-206ENST00000524028 CCDC171Q6TFL3 1326 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms