RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 DACT2Q5SW24 774 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 RSRC2Q7L4I2 434 aaKnown RBP7.29□□□□□ -1.24
SDC2-208ENST00000523877 NANOGNBQ7Z5D8 188 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 PNMA8AQ86V59 439 aaPredicted RBP7.29□□□□□ -1.24
SDC2-208ENST00000523877 PGBD3Q8N328 593 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 KCT2Q8NC54 265 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 KIF18AQ8NI77 898 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 CCHCR1Q8TD31 782 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 TRPC4APQ8TEL6 797 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 NUDT12Q9BQG2 462 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 TTPALQ9BTX7 342 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 C12orf49Q9H741 205 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 ATP6V0A4Q9HBG4 840 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 PARVGQ9HBI0 331 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 STARD7Q9NQZ5 370 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 FKBP14Q9NWM8 211 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 LAMP5Q9UJQ1 280 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 AGTPBP1Q9UPW5 1226 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 SATB2Q9UPW6 733 aa7.29□□□□□ -1.24
SDC2-208ENST00000523877 PPP1R3GB7ZBB8 358 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 INO80B-WBP1J3KQ70 363 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 PPEF1O14829 653 aaPredicted RBP7.28□□□□□ -1.24
SDC2-208ENST00000523877 CDC45O75419 566 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 AGR2O95994 175 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 RHOXF2BP0C7M4 288 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 TROVE2P10155 538 aaKnown RBP eCLIP7.28□□□□□ -1.24
SDC2-208ENST00000523877 MLLT3P42568 568 aaPredicted RBP7.28□□□□□ -1.24
SDC2-208ENST00000523877 ASMTP46597 345 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 APBA1Q02410 837 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 RUNX1T1Q06455 604 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 FAPQ12884 760 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 WDR43Q15061 677 aaKnown RBP eCLIP7.28□□□□□ -1.24
SDC2-208ENST00000523877 TYW1BQ6NUM6 668 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 SYT10Q6XYQ8 523 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 PPP1R21Q6ZMI0 780 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 RALYLQ86SE5 291 aaKnown RBP7.28□□□□□ -1.24
SDC2-208ENST00000523877 CCDC13Q8IYE1 715 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 TRIM22Q8IYM9 498 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 TAB3Q8N5C8 712 aaPredicted RBP7.28□□□□□ -1.24
SDC2-208ENST00000523877 TMEM57Q8N5G2 664 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 RNF10Q8N5U6 811 aaKnown RBP7.28□□□□□ -1.24
SDC2-208ENST00000523877 IQUBQ8NA54 791 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 SPC24Q8NBT2 197 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 MGARPQ8TDB4 240 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 FNIP1Q8TF40 1166 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 ZNF606Q8WXB4 792 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 ARHGAP45Q92619 1136 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 SLC35B4Q969S0 331 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 PPP1R14BQ96C90 147 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 SAAL1Q96ER3 474 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 HIC2Q96JB3 615 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 CNDP2Q96KP4 475 aaKnown RBP7.28□□□□□ -1.24
SDC2-208ENST00000523877 CEP295NLQ96MC4 621 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 COG8Q96MW5 612 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 TSGA13Q96PP4 275 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 RHOXF2Q9BQY4 288 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 PANK2Q9BZ23 570 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 TTC12Q9H892 705 aaPredicted RBP7.28□□□□□ -1.24
SDC2-208ENST00000523877 PFDN2Q9UHV9 154 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 PAIP2BQ9ULR5 123 aaKnown RBP7.28□□□□□ -1.24
SDC2-208ENST00000523877 DUSP12Q9UNI6 340 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 SPG7Q9UQ90 795 aa7.28□□□□□ -1.24
SDC2-208ENST00000523877 KIF13AQ9H1H9 1805 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 LRRC10BA6NIK2 292 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 FYB1O15117 783 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 ATP8B1O43520 1251 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 AHCYL1O43865 530 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 PRMT3O60678 531 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 TSC22D2O75157 780 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 ADAMTS4O75173 837 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 TRPA1O75762 1119 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 SLC4A1P02730 911 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 HCLS1P14317 486 aaPredicted RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 ATP5JP18859 108 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 PSMA4P25789 261 aaKnown RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 PRKAR1BP31321 381 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 SERPINB4P48594 390 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 BCAMP50895 628 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 RRP1P56182 461 aaKnown RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 CHMP4BP1P59074 171 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 TUBA4AP68366 448 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 RELQ04864 619 aaPredicted RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 TTF1Q15361 905 aaPredicted RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 BBS9Q3SYG4 887 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 EAPPQ56P03 285 aaPredicted RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 ARSHQ5FYA8 562 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 LDLRAD1Q5T700 205 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 METTL11BQ5VVY1 283 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 LVRNQ6Q4G3 990 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 KDELC1Q6UW63 502 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 B4GALNT4Q76KP1 1039 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 ZNF804AQ7Z570 1209 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 PACS2Q86VP3 889 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 SPATA2LQ8IUW3 424 aaPredicted RBP7.27□□□□□ -1.25
SDC2-208ENST00000523877 ITPRIPQ8IWB1 547 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 WDR63Q8IWG1 891 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 AADATQ8N5Z0 425 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 MTMR14Q8NCE2 650 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 TTC8Q8TAM2 541 aa7.27□□□□□ -1.25
SDC2-208ENST00000523877 MDM1Q8TC05 714 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms