RNA–Protein interactions for RNA: ENST00000523276.1

SHPRH-210, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 2,030 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-210ENST00000523276 GOLGA8HP0CJ92 632 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 SFPQP23246 707 aaKnown RBP eCLIP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 SMARCA1P28370 1054 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 PDE6BP35913 854 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 LONP1P36776 959 aaKnown RBP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 AFMP43652 599 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 GABPAQ06546 454 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 CFAP100Q494V2 611 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 PDXDC2PQ6P474 469 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 RASGRP2Q7LDG7 609 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 VSTM4Q8IW00 320 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 IQUBQ8NA54 791 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 RASGRP4Q8TDF6 673 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 C16orf45Q96MC5 204 aaPredicted RBP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 GSDMAQ96QA5 445 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 NFE2L3Q9Y4A8 694 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 MYH6P13533 1939 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 ANKRD31Q8N7Z5 1873 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 IGKV6D-41A0A0C4DH26 115 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 USP27XA6NNY8 438 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 F8W031 263 aaPredicted RBP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 MMP10P09238 476 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 TNNT1P13805 278 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 KCNJ6P48051 423 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 USP17L2Q6R6M4 530 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 CCAR2Q8N163 923 aaKnown RBP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 CCDC12Q8WUD4 166 aaPredicted RBP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 RRP36Q96EU6 259 aaKnown RBP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 CCDC97Q96F63 343 aaPredicted RBP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 MASTLQ96GX5 879 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 MED15Q96RN5 788 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 ZMYND12Q9H0C1 365 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 DDX4Q9NQI0 724 aaKnown RBP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 INTS13Q9NVM9 706 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 TTF2Q9UNY4 1162 aaKnown RBP7.56□□□□□ -1.2
SHPRH-210ENST00000523276 PARP3Q9Y6F1 533 aa7.56□□□□□ -1.2
SHPRH-210ENST00000523276 QSER1Q2KHR3 1735 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 USP17L5A8MUK1 530 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 TMEM232C9JQI7 657 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 NRDCO43847 1150 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 APBA3O96018 575 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 CASP1P29466 404 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 NAPAP54920 295 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 PICALMQ13492 652 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 CUL4BQ13620 913 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 DOK7Q18PE1 504 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 HHIPL2Q6UWX4 724 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 MAMSTRQ6ZN01 415 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 NYAP1Q6ZVC0 841 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 KRT25Q7Z3Z0 450 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 TRMT44Q8IYL2 757 aaKnown RBP7.55□□□□□ -1.2
SHPRH-210ENST00000523276 MXD3Q9BW11 206 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 CPVLQ9H3G5 476 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 USP40Q9NVE5 1235 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 MTMR4Q9NYA4 1195 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 MYO3BQ8WXR4 1341 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 C10orf71Q711Q0 1435 aa7.55□□□□□ -1.2
SHPRH-210ENST00000523276 SYNRGQ9UMZ2 1314 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 PPP1R3GB7ZBB8 358 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 LAD1O00515 517 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 AKR1B1P15121 316 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 TXLNAP40222 546 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 PRPHP41219 470 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 INF2Q27J81 1249 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 SPATA1Q5VX52 437 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 CDC42EP5Q6NZY7 148 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 DTHD1Q6ZMT9 781 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 PIGSQ96S52 555 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 MTRQ99707 1265 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 TMX4Q9H1E5 349 aaPredicted RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 TMEM60Q9H2L4 133 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 RIOX1Q9H6W3 641 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 C6orf50Q9HD87 102 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 SEC63Q9UGP8 760 aaKnown RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 SWAP70Q9UH65 585 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 CDK5RAP2Q96SN8 1893 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 ESYT2A0FGR8 921 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 PSDA5PKW4 1024 aaPredicted RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 SMCO2A6NFE2 343 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 hCG_1984214I3L0E3 225 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 RRP9O43818 475 aaKnown RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 SNHG28P0DPA3 235 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 PDHBP11177 359 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 CDK11BP21127 795 aaKnown RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 GNA11P29992 359 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 SHMT1P34896 483 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 SCNN1DP51172 638 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 TBX2Q13207 712 aaPredicted RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 NONOQ15233 471 aaKnown RBP eCLIP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 ASPRV1Q53RT3 343 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 HSP90AA4PQ58FG1 418 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 CEP135Q66GS9 1140 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 E4F1Q66K89 784 aaPredicted RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 ZNF772Q68DY9 489 aaPredicted RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 APOBEC3HQ6NTF7 200 aaKnown RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 HOMER1Q86YM7 354 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 ZNF713Q8N859 430 aaPredicted RBP7.54□□□□□ -1.2
SHPRH-210ENST00000523276 CCDC112Q8NEF3 446 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 STAMQ92783 540 aa7.54□□□□□ -1.2
SHPRH-210ENST00000523276 TEKT1Q969V4 418 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms