RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GPKOWQ92917 476 aaPredicted RBP eCLIP17.89■□□□□ 0.45
USP42-207ENST00000521713 CDC42BPBQ9Y5S2 1711 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 MECOMQ03112 1051 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 JAKMIP2Q96AA8 810 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 CAPZA3Q96KX2 299 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 NRBP2Q9NSY0 501 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 NFE2L3Q9Y4A8 694 aa17.89■□□□□ 0.45
USP42-207ENST00000521713 BTBD18B2RXH4 712 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 M0R2C6 588 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 TRIM28Q13263 835 aaKnown RBP17.88■□□□□ 0.45
USP42-207ENST00000521713 CCDC122Q5T0U0 273 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 GOLGA5Q8TBA6 731 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 CCDC160A6NGH7 325 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 PI16Q6UXB8 463 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 CEP128Q6ZU80 1094 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 GPBP1Q86WP2 473 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 CCDC26Q8TAB7 109 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 RAD51AP2Q09MP3 1159 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 DIXDC1Q155Q3 683 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 FAM47CQ5HY64 1035 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 DPP9Q86TI2 863 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 CCDC110Q8TBZ0 833 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 OSBP2Q969R2 916 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 IQCDQ96DY2 449 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 TSNAXIP1Q2TAA8 658 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 INTS8Q75QN2 995 aaKnown RBP17.88■□□□□ 0.45
USP42-207ENST00000521713 ISCA1Q9BUE6 129 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 CBX8Q9HC52 389 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 MINPP1Q9UNW1 487 aa17.88■□□□□ 0.45
USP42-207ENST00000521713 RIMBP3CA6NJZ7 1639 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 RIMBP3BA6NNM3 1639 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 RIMBP3Q9UFD9 1639 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 ATP8B1O43520 1251 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 BCRP11274 1271 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 TMOD1P28289 359 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 TECP42680 631 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 ASIC2Q16515 512 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 NELFCDQ8IXH7 590 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 UIMC1Q96RL1 719 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 RABGAP1Q9Y3P9 1069 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 RGS12O14924 1447 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 GBP1P32455 592 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 FANCCQ00597 558 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 XKR9Q5GH70 373 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 FAM160B1Q5W0V3 765 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 SPICE1Q8N0Z3 855 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 PAIP2Q9BPZ3 127 aaKnown RBP17.87■□□□□ 0.45
USP42-207ENST00000521713 TBC1D7Q9P0N9 293 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 PNPLA6Q8IY17 1366 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 LAD1O00515 517 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 P4HA1P13674 534 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 SLC9C1Q4G0N8 1177 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 CYP26C1Q6V0L0 522 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 NAP1L3Q99457 506 aaPredicted RBP17.87■□□□□ 0.45
USP42-207ENST00000521713 SERTAD1Q9UHV2 236 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 KIF3CO14782 793 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 YWHAEP62258 255 aaKnown RBP17.87■□□□□ 0.45
USP42-207ENST00000521713 TBC1D9BQ66K14 1250 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 NELFBQ8WX92 580 aa17.87■□□□□ 0.45
USP42-207ENST00000521713 PUS7LQ9H0K6 701 aaKnown RBP17.87■□□□□ 0.45
USP42-207ENST00000521713 BUB1BO60566 1050 aaPredicted RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 GDF11O95390 407 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 FAM160B2Q86V87 743 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 IFT20Q8IY31 132 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 IFT81Q8WYA0 676 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 STMN2Q93045 179 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 NOL3O60936 208 aaKnown RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 GCFC2P16383 781 aaKnown RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 LONP1P36776 959 aaKnown RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 ZNF589Q86UQ0 364 aaPredicted RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 CDHR1Q96JP9 859 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 MAK16Q9BXY0 300 aaKnown RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 NUCKS1Q9H1E3 243 aaKnown RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 FEZ2Q9UHY8 353 aaPredicted RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 COL4A3BPQ9Y5P4 624 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 GOLGA6BA6NDN3 693 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 PRKAB2O43741 272 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 LAMC1P11047 1609 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 CNGA1P29973 690 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 METTL13Q8N6R0 699 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 USP28Q96RU2 1077 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 ADPGKQ9BRR6 497 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 PPFIA4O75335 1185 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 CMA1P23946 247 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 MYOCDQ8IZQ8 938 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 BRIP1Q9BX63 1249 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 VCXQ9H320 206 aa17.86■□□□□ 0.45
USP42-207ENST00000521713 FOXP1Q9H334 677 aaPredicted RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 PIH1D3Q9NQM4 214 aaKnown RBP17.86■□□□□ 0.45
USP42-207ENST00000521713 KCNQ2O43526 872 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 SEL1L2Q5TEA6 688 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 TMTC1Q8IUR5 882 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 NKIRAS1Q9NYS0 192 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 MTMR6Q9Y217 621 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 ASNSP08243 561 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 FAM102BQ5T8I3 360 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 RC3H1Q5TC82 1133 aaKnown RBP17.85■□□□□ 0.45
USP42-207ENST00000521713 C8orf74Q6P047 294 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 RASEFQ8IZ41 740 aa17.85■□□□□ 0.45
USP42-207ENST00000521713 KIAA1524Q8TCG1 905 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms