RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 HNRNPUQ00839 825 aaKnown RBP eCLIP13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 ARMCX2Q7L311 632 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 CPXCR1Q8N123 301 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 TMEM199Q8N511 208 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 FAM133AQ8N9E0 248 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 HERVK_113Q902F9 699 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 MKNK2Q9HBH9 465 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 RAVER2Q9HCJ3 691 aaKnown RBP13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 MTMR4Q9NYA4 1195 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 CLIP2Q9UDT6 1046 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 FEM1BQ9UK73 627 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 DDX19BQ9UMR2 479 aa13.77□□□□□ -0.21
IGHV3-60-201ENST00000521678 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
IGHV3-60-201ENST00000521678 REV3LO60673 3130 aa13.76□□□□□ -0.21
IGHV3-60-201ENST00000521678 FDX1P10109 184 aa13.76□□□□□ -0.21
IGHV3-60-201ENST00000521678 ADGRE1Q14246 886 aa13.76□□□□□ -0.21
IGHV3-60-201ENST00000521678 PSRC1Q6PGN9 363 aaPredicted RBP13.76□□□□□ -0.21
IGHV3-60-201ENST00000521678 ANKRD35Q8N283 1001 aa13.76□□□□□ -0.21
IGHV3-60-201ENST00000521678 OSBP2Q969R2 916 aa13.76□□□□□ -0.21
IGHV3-60-201ENST00000521678 VTI1AQ96AJ9 217 aa13.76□□□□□ -0.21
IGHV3-60-201ENST00000521678 IL23AQ9NPF7 189 aa13.76□□□□□ -0.21
IGHV3-60-201ENST00000521678 ASTN1O14525 1302 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 GRIN2DO15399 1336 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 BAZ2AQ9UIF9 1905 aaKnown RBP13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 ACRP10323 421 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 CYP2C18P33260 490 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 CNTN2Q02246 1040 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 CCDC144CPQ8IYA2 1237 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 KBTBD3Q8NAB2 608 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 GMCL1P1Q8NEA9 526 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 KIFC2Q96AC6 838 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 ASB2Q96Q27 587 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 GAS2L1Q99501 681 aaPredicted RBP13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 SEZ6LQ9BYH1 1024 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 PRDM12Q9H4Q4 367 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 CXXC1Q9P0U4 656 aaPredicted RBP13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 GNEQ9Y223 722 aaKnown RBP13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 COG6Q9Y2V7 657 aa13.75□□□□□ -0.21
IGHV3-60-201ENST00000521678 XIRP2A4UGR9 3374 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 PLXNA1Q9UIW2 1896 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 SOWAHBA6NEL2 793 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 TLR3O15455 904 aaKnown RBP13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 CABYRO75952 493 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 FGBP02675 491 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 CCDC129Q6ZRS4 1044 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 ZNF444Q8N0Y2 327 aaPredicted RBP13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 NEDD1Q8NHV4 660 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 VWCEQ96DN2 955 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 CEP95Q96GE4 821 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 PPP1R12CQ9BZL4 782 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 BCL11AQ9H165 835 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 ECHDC1Q9NTX5 307 aa13.74□□□□□ -0.21
IGHV3-60-201ENST00000521678 ZNF536O15090 1300 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 PLA2G6O60733 806 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 TTLL1O95922 423 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 COL9A1P20849 921 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 SLC4A3P48751 1232 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 BEX3Q00994 111 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 TNFAIP2Q03169 654 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 RAB30Q15771 203 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 CXCL17Q6UXB2 119 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 APPBP2Q92624 585 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 LRRCC1Q9C099 1032 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 CHMP4BQ9H444 224 aaKnown RBP13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 ZNF287Q9HBT7 754 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 EPB41L4AQ9HCS5 686 aaPredicted RBP13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 MSRAQ9UJ68 235 aa13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 CTDP1Q9Y5B0 961 aaPredicted RBP13.73□□□□□ -0.21
IGHV3-60-201ENST00000521678 MYO9BQ13459 2157 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 PATL2C9JE40 543 aaKnown RBP13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 RNF113AO15541 343 aaKnown RBP13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 BMP3P12645 472 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 GNAT2P19087 354 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 MRPS5P82675 430 aaKnown RBP13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 ITGA7Q13683 1181 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 TAPT1Q6NXT6 567 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 STK11IPQ8N1F8 1099 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 CHURC1Q8WUH1 139 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 GMCL1Q96IK5 515 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 ACAD9Q9H845 621 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 A1CFQ9NQ94 594 aaKnown RBP13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 THEGQ9P2T0 379 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 YBX2Q9Y2T7 364 aaKnown RBP13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 Q9Y3F1 56 aa13.72□□□□□ -0.21
IGHV3-60-201ENST00000521678 UMODL1Q5DID0 1318 aa13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 MYH8P13535 1937 aa13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 ASB14A6NK59 587 aa13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 TMEM232C9JQI7 657 aa13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 GPAA1O43292 621 aa13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 SMARCA5O60264 1052 aaPredicted RBP13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 PRDM1O75626 825 aa13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 ZFYP08048 801 aaPredicted RBP13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 SMPD1P17405 629 aa13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 FSCN1Q16658 493 aaKnown RBP13.71□□□□□ -0.21
IGHV3-60-201ENST00000521678 TKFCQ3LXA3 575 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms