RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 SKOR2Q2VWA4 1001 aaPredicted RBP17.31■□□□□ 0.36
SREK1-209ENST00000520953 GADL1Q6ZQY3 521 aa17.31■□□□□ 0.36
SREK1-209ENST00000520953 TMOD4Q9NZQ9 345 aa17.31■□□□□ 0.36
SREK1-209ENST00000520953 MYH15Q9Y2K3 1946 aa17.31■□□□□ 0.36
SREK1-209ENST00000520953 A0A0G2JLL6 359 aaPredicted RBP17.3■□□□□ 0.36
SREK1-209ENST00000520953 U2AF2P26368 475 aaKnown RBP eCLIP17.3■□□□□ 0.363e-10■■■□□ 14.9
SREK1-209ENST00000520953 CEBPZQ03701 1054 aaKnown RBP17.3■□□□□ 0.36
SREK1-209ENST00000520953 PRRT2Q7Z6L0 340 aaPredicted RBP17.3■□□□□ 0.36
SREK1-209ENST00000520953 CHURC1Q8WUH1 139 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 ATG4CQ96DT6 458 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 RANBP17Q9H2T7 1088 aaKnown RBP17.3■□□□□ 0.36
SREK1-209ENST00000520953 KCNH4Q9UQ05 1017 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 FSD2A1L4K1 749 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 SMCO2A6NFE2 343 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 POTEEQ6S8J3 1075 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 TNFRSF25Q93038 417 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 PCDHA1Q9Y5I3 950 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 LOC285556D6RIA3 1793 aa17.3■□□□□ 0.36
SREK1-209ENST00000520953 ZNF536O15090 1300 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 WNT7AO00755 349 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 PLA2G6O60733 806 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 XBP1P17861 261 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 NCLP19338 710 aaKnown RBP17.29■□□□□ 0.36
SREK1-209ENST00000520953 KRT2P35908 639 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 HUNKP57058 714 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
SREK1-209ENST00000520953 FAM160B2Q86V87 743 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 RBM46Q8TBY0 533 aaKnown RBP17.29■□□□□ 0.36
SREK1-209ENST00000520953 AGBL1Q96MI9 1066 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 SH3GLB2Q9NR46 395 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 TMEM260Q9NX78 707 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 FIBPO43427 364 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 FKBP1BP68106 108 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 CATSPERGQ6ZRH7 1159 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 FBXO11Q86XK2 927 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 NOSTRINQ8IVI9 506 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 PRPF38AQ8NAV1 312 aaKnown RBP17.29■□□□□ 0.36
SREK1-209ENST00000520953 USP28Q96RU2 1077 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 ZMYND12Q9H0C1 365 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 ZSCAN16Q9H4T2 348 aaPredicted RBP17.29■□□□□ 0.36
SREK1-209ENST00000520953 PCDHA4Q9UN74 947 aa17.29■□□□□ 0.36
SREK1-209ENST00000520953 M0R2N6 131 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 OPLAHO14841 1288 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 SAFBQ15424 915 aaKnown RBP eCLIP17.28■□□□□ 0.36
SREK1-209ENST00000520953 UBE2SQ16763 222 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 TPRNQ4KMQ1 711 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 BLIDQ8IZY5 108 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 CPXCR1Q8N123 301 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 PGBD1Q96JS3 809 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 RAVER2Q9HCJ3 691 aaKnown RBP17.28■□□□□ 0.36
SREK1-209ENST00000520953 COL11A1P12107 1806 aaPredicted RBP17.28■□□□□ 0.36
SREK1-209ENST00000520953 CXCL11O14625 94 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 PDIA4P13667 645 aaKnown RBP17.28■□□□□ 0.36
SREK1-209ENST00000520953 TOB1P50616 345 aaPredicted RBP17.28■□□□□ 0.36
SREK1-209ENST00000520953 AMNQ9BXJ7 453 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 FOXP1Q9H334 677 aaPredicted RBP17.28■□□□□ 0.36
SREK1-209ENST00000520953 PCDHA6Q9UN73 950 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 PCDHA8Q9Y5H6 950 aa17.28■□□□□ 0.36
SREK1-209ENST00000520953 GOLGA6L3A6NEY3 463 aa17.27■□□□□ 0.36
SREK1-209ENST00000520953 ATP2B1P20020 1258 aa17.27■□□□□ 0.36
SREK1-209ENST00000520953 GPAT2Q6NUI2 795 aa17.27■□□□□ 0.36
SREK1-209ENST00000520953 CCDC148Q8NFR7 591 aa17.27■□□□□ 0.36
SREK1-209ENST00000520953 TBC1D5Q92609 795 aa17.27■□□□□ 0.36
SREK1-209ENST00000520953 P2RX7Q99572 595 aaKnown RBP17.27■□□□□ 0.36
SREK1-209ENST00000520953 SLC38A10Q9HBR0 1119 aa17.27■□□□□ 0.36
SREK1-209ENST00000520953 LMBRD1Q9NUN5 540 aa17.27■□□□□ 0.36
SREK1-209ENST00000520953 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.36
SREK1-209ENST00000520953 CLIC4Q9Y696 253 aa17.27■□□□□ 0.36
SREK1-209ENST00000520953 USP17L15C9J2P7 530 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 USP17L13C9JLJ4 530 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 USP17L11C9JVI0 530 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 USP17L18D6R9N7 530 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 USP17L22D6RA61 530 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 USP17L17D6RBQ6 530 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 USP17L19D6RCP7 530 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 USP17L20D6RJB6 530 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 VWA5AO00534 786 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 YY1P25490 414 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 USP17L24Q0WX57 530 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 L1TD1Q5T7N2 865 aaKnown RBP17.26■□□□□ 0.35
SREK1-209ENST00000520953 JAKMIP3Q5VZ66 844 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 USP17L6PQ6QN14 398 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 PIK3AP1Q6ZUJ8 805 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 ZNF784Q8NCA9 323 aaPredicted RBP17.26■□□□□ 0.35
SREK1-209ENST00000520953 MS4A4AQ96JQ5 239 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
SREK1-209ENST00000520953 DSG3P32926 999 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 BRAPQ7Z569 592 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 SAPCD2Q86UD0 394 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 RGS22Q8NE09 1264 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 REPS2Q8NFH8 660 aa17.26■□□□□ 0.35
SREK1-209ENST00000520953 CALML3P27482 149 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 ADCY7P51828 1080 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 COG2Q14746 738 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 KLHL40Q2TBA0 621 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 DAGLBQ8NCG7 672 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 SMC1BQ8NDV3 1235 aa17.25■□□□□ 0.35
SREK1-209ENST00000520953 RIPK3Q9Y572 518 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms