RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 ZHX2Q9Y6X8 837 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 KIAA1217Q5T5P2 1943 aa9.83□□□□□ -0.84
VAPB-206ENST00000520497 WDR81Q562E7 1941 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 PNMA6FA0A0J9YX94 578 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 C19orf81C9J6K1 198 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 STXBP3O00186 592 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 ZBTB5O15062 677 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 PPP1R11O60927 126 aaPredicted RBP9.82□□□□□ -0.84
VAPB-206ENST00000520497 VCAM1P19320 739 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 FKBP1BP68106 108 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 DGKZQ13574 1117 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 TRIM29Q14134 588 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 SYDE2Q5VT97 1194 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 PAXIP1Q6ZW49 1069 aaPredicted RBP9.82□□□□□ -0.84
VAPB-206ENST00000520497 BRAPQ7Z569 592 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 FAM160B2Q86V87 743 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 DAGLBQ8NCG7 672 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 PIBF1Q8WXW3 757 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 GPKOWQ92917 476 aaPredicted RBP eCLIP9.82□□□□□ -0.84
VAPB-206ENST00000520497 CLMNQ96JQ2 1002 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 ZNF408Q9H9D4 720 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 SEC63Q9UGP8 760 aaKnown RBP9.82□□□□□ -0.84
VAPB-206ENST00000520497 KCNJ14Q9UNX9 436 aa9.82□□□□□ -0.84
VAPB-206ENST00000520497 ESYT2A0FGR8 921 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 TRIM75PA6NK02 468 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 CELF2O95319 508 aaKnown RBP9.81□□□□□ -0.84
VAPB-206ENST00000520497 PRKAR2AP13861 404 aaKnown RBP9.81□□□□□ -0.84
VAPB-206ENST00000520497 HMGCS2P54868 508 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 PPATQ06203 517 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 CDC37Q16543 378 aaPredicted RBP9.81□□□□□ -0.84
VAPB-206ENST00000520497 QRICH1Q2TAL8 776 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 MCTP1Q6DN14 999 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 PPP1R18Q6NYC8 613 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 ERO1BQ86YB8 467 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 HOMER1Q86YM7 354 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 DIS3L2Q8IYB7 885 aaKnown RBP9.81□□□□□ -0.84
VAPB-206ENST00000520497 CCDC148Q8NFR7 591 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 CHURC1Q8WUH1 139 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 TNFRSF25Q93038 417 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 CHAMP1Q96JM3 812 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 ZMYND12Q9H0C1 365 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 FOXP1Q9H334 677 aaPredicted RBP9.81□□□□□ -0.84
VAPB-206ENST00000520497 VAT1LQ9HCJ6 419 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 FEM1BQ9UK73 627 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 PRR12Q9ULL5 1215 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 KCNH4Q9UQ05 1017 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 TLL2Q9Y6L7 1015 aa9.81□□□□□ -0.84
VAPB-206ENST00000520497 DOCK3Q8IZD9 2030 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 BTBD18B2RXH4 712 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 M0R2N6 131 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 CALML3P27482 149 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 KRT2P35908 639 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 CTCFP49711 727 aaPredicted RBP9.8□□□□□ -0.84
VAPB-206ENST00000520497 DNM1Q05193 864 aaKnown RBP9.8□□□□□ -0.84
VAPB-206ENST00000520497 PPIL2Q13356 520 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 TTLL12Q14166 644 aaPredicted RBP9.8□□□□□ -0.84
VAPB-206ENST00000520497 SAFBQ15424 915 aaKnown RBP eCLIP9.8□□□□□ -0.84
VAPB-206ENST00000520497 MYSM1Q5VVJ2 828 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 GALNT17Q6IS24 598 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 FAM173BQ6P4H8 233 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 HEATR3Q7Z4Q2 680 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 NOSTRINQ8IVI9 506 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 OXER1Q8TDS5 423 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 RANBP17Q9H2T7 1088 aaKnown RBP9.8□□□□□ -0.84
VAPB-206ENST00000520497 ELP3Q9H9T3 547 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 GBA2Q9HCG7 927 aaPredicted RBP9.8□□□□□ -0.84
VAPB-206ENST00000520497 FBXO28Q9NVF7 368 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 ISY1Q9ULR0 285 aaKnown RBP9.8□□□□□ -0.84
VAPB-206ENST00000520497 THSD7BQ9C0I4 1608 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 PLXNA1Q9UIW2 1896 aa9.8□□□□□ -0.84
VAPB-206ENST00000520497 A0A0G2JLL6 359 aaPredicted RBP9.79□□□□□ -0.84
VAPB-206ENST00000520497 CXCL11O14625 94 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 IRF6O14896 467 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 ADAMTS3O15072 1205 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 TRAK2O60296 914 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 MBD3O95983 291 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 NAPAP54920 295 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 KRT85P78386 507 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 IKQ13123 557 aaPredicted RBP9.79□□□□□ -0.84
VAPB-206ENST00000520497 NR5A1Q13285 461 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 ATL3Q6DD88 541 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 PRRT2Q7Z6L0 340 aaPredicted RBP9.79□□□□□ -0.84
VAPB-206ENST00000520497 SAPCD2Q86UD0 394 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 TMEM87AQ8NBN3 555 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 PROCA1Q8NCQ7 364 aaPredicted RBP9.79□□□□□ -0.84
VAPB-206ENST00000520497 CCDC12Q8WUD4 166 aaPredicted RBP9.79□□□□□ -0.84
VAPB-206ENST00000520497 SYAP1Q96A49 352 aaPredicted RBP9.79□□□□□ -0.84
VAPB-206ENST00000520497 COA7Q96BR5 231 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 OTUD5Q96G74 571 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 SLF1Q9BQI6 1058 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 RPAP3Q9H6T3 665 aaPredicted RBP9.79□□□□□ -0.84
VAPB-206ENST00000520497 BRMS1Q9HCU9 246 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 PRDM10Q9NQV6 1147 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 PPP1R9AQ9ULJ8 1098 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 PCDHA4Q9UN74 947 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 PLXNB2O15031 1838 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 MCM3APO60318 1980 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 MYPNQ86TC9 1320 aa9.79□□□□□ -0.84
VAPB-206ENST00000520497 FLOT1O75955 427 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms