RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 EAF2Q96CJ1 260 aaPredicted RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 MRPL44Q9H9J2 332 aaKnown RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 hCG_1642624A0A1W2PR95 340 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 EFCAB8A8MWE9 144 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 MYSM1Q5VVJ2 828 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 C17orf53Q8N3J3 647 aaPredicted RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 NT5C3AQ9H0P0 336 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 ACTR5Q9H9F9 607 aaPredicted RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 ARHGAP6O43182 974 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 HSPD1P10809 573 aaKnown RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 MAP3K7CLP57077 242 aa13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 ZNF215Q9UL58 517 aaPredicted RBP13.28□□□□□ -0.28
ERGIC1-208ENST00000520399 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 GNA14O95837 355 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 HHATQ5VTY9 493 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 PHLDB3Q6NSJ2 640 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 TPCN1Q9ULQ1 816 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 NOP56O00567 594 aaKnown RBP13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 DDAH1O94760 285 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 PFKFB1P16118 471 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 MTX1Q13505 466 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 SFMBT2Q5VUG0 894 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 MAEAQ7L5Y9 396 aa13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.27□□□□□ -0.28
ERGIC1-208ENST00000520399 HECW2Q9P2P5 1572 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 ATP2B4P23634 1241 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 SLC12A2P55011 1212 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 GNGT1P63211 74 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 CAPS2Q9BXY5 557 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 ATP8A2Q9NTI2 1148 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 ZCCHC11Q5TAX3 1644 aaKnown RBP13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 CIAO1O76071 339 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 ELF1P32519 619 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 LRRC24Q50LG9 513 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 IFT20Q8IY31 132 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 NIM1KQ8IY84 436 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 SCOCQ9UIL1 159 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 TSKSQ9UJT2 592 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 NOD1Q9Y239 953 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 METP08581 1390 aa13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 PRDM15P57071 1507 aaPredicted RBP13.27□□□□□ -0.29
ERGIC1-208ENST00000520399 PALM3A6NDB9 673 aaPredicted RBP13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 PDE6AP16499 860 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 NELFCDQ8IXH7 590 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 BLIDQ8IZY5 108 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 SYCE1Q8N0S2 351 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 UGGT1Q9NYU2 1555 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 CCT5P48643 541 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 KIF11P52732 1056 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 TMED1Q13445 227 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 SPDL1Q96EA4 605 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 FAM8A1Q9UBU6 413 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 BAG5Q9UL15 447 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 GOLGA8KD6RF30 607 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 TTC19Q6DKK2 380 aaPredicted RBP13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 TRMT2AQ8IZ69 625 aaKnown RBP13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 ACRBPQ8NEB7 543 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 CXorf38Q8TB03 319 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 TEKT1Q969V4 418 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 XAB2Q9HCS7 855 aaKnown RBP13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 SPECC1L-ADORA2AF8WAN1 911 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 ECM2O94769 699 aaPredicted RBP13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 CFBP00751 764 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 BCRP11274 1271 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 BCAMP50895 628 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 RPS6KA2Q15349 733 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 OSBPL9Q96SU4 736 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 CHRNDQ07001 517 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 CAPRIN2Q6IMN6 1127 aaKnown RBP13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 TRMT44Q8IYL2 757 aaKnown RBP13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 SDCCAG3Q96C92 435 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 Q9H521 79 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 AZI2Q9H6S1 392 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 FAN1Q9Y2M0 1017 aa13.26□□□□□ -0.29
ERGIC1-208ENST00000520399 USP17L12C9JPN9 530 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 USP17L21D6R901 530 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 GYG1P46976 350 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 GTF2IP78347 998 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 DLGAP5Q15398 846 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 MFSD14BQ5SR56 506 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 ACBD5Q5T8D3 534 aaPredicted RBP13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 LSG1Q9H089 658 aaKnown RBP13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 PALD1Q9ULE6 856 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 EXOC3O60645 756 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 E2F5Q15329 346 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 ATP2A3Q93084 1043 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 CCDC51Q96ER9 411 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 LONRF3Q496Y0 759 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 TMEM63CQ9P1W3 806 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 MORC2Q9Y6X9 1032 aaPredicted RBP13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 DTNBO60941 627 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 GCFC2P16383 781 aaKnown RBP13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 PHEXP78562 749 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 KLHL30Q0D2K2 578 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 SLC30A9Q6PML9 568 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 VSIG1Q86XK7 387 aa13.25□□□□□ -0.29
ERGIC1-208ENST00000520399 STAP2Q9UGK3 403 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms