RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 CHST13Q8NET6 341 aa16.6■□□□□ 0.25
VEGFA-221ENST00000520265 NCOA7Q8NI08 942 aa16.6■□□□□ 0.25
VEGFA-221ENST00000520265 DIS3LQ8TF46 1054 aaKnown RBP16.6■□□□□ 0.25
VEGFA-221ENST00000520265 PAWRQ96IZ0 340 aaKnown RBP16.6■□□□□ 0.25
VEGFA-221ENST00000520265 IFIT3O14879 490 aaKnown RBP16.59■□□□□ 0.25
VEGFA-221ENST00000520265 ATP2A1O14983 1001 aa16.59■□□□□ 0.25
VEGFA-221ENST00000520265 CDC45O75419 566 aa16.59■□□□□ 0.25
VEGFA-221ENST00000520265 ZNF543Q08ER8 600 aa16.59■□□□□ 0.25
VEGFA-221ENST00000520265 CYB5R4Q7L1T6 521 aa16.59■□□□□ 0.25
VEGFA-221ENST00000520265 CHST3Q7LGC8 479 aa16.59■□□□□ 0.25
VEGFA-221ENST00000520265 NECAB2Q7Z6G3 386 aa16.59■□□□□ 0.25
VEGFA-221ENST00000520265 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
VEGFA-221ENST00000520265 DDX20Q9UHI6 824 aaKnown RBP16.59■□□□□ 0.25
VEGFA-221ENST00000520265 CNPY2Q9Y2B0 182 aa16.59■□□□□ 0.25
VEGFA-221ENST00000520265 TNRC18O15417 2968 aaPredicted RBP16.59■□□□□ 0.25
VEGFA-221ENST00000520265 E7EWF7 191 aa16.58■□□□□ 0.24
VEGFA-221ENST00000520265 PLA2G6O60733 806 aa16.58■□□□□ 0.24
VEGFA-221ENST00000520265 PARP1P09874 1014 aaKnown RBP16.58■□□□□ 0.24
VEGFA-221ENST00000520265 GPATCH4Q5T3I0 446 aaKnown RBP16.58■□□□□ 0.24
VEGFA-221ENST00000520265 NSMFQ6X4W1 530 aa16.58■□□□□ 0.24
VEGFA-221ENST00000520265 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.24
VEGFA-221ENST00000520265 CRISPLD2Q9H0B8 497 aa16.58■□□□□ 0.24
VEGFA-221ENST00000520265 CPVLQ9H3G5 476 aa16.58■□□□□ 0.24
VEGFA-221ENST00000520265 ZHX1Q9UKY1 873 aaPredicted RBP16.58■□□□□ 0.24
VEGFA-221ENST00000520265 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
VEGFA-221ENST00000520265 PLXNA1Q9UIW2 1896 aa16.58■□□□□ 0.24
VEGFA-221ENST00000520265 ZNFX1Q9P2E3 1918 aaKnown RBP16.58■□□□□ 0.24
VEGFA-221ENST00000520265 MKI67P46013 3256 aaKnown RBP16.57■□□□□ 0.24
VEGFA-221ENST00000520265 POTEB2H3BUK9 544 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 MSCO60682 206 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 CYBAP13498 195 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 WTAPQ15007 396 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 ZNF792Q3KQV3 632 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 TKFCQ3LXA3 575 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 USH1GQ495M9 461 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 PRPF38BQ5VTL8 546 aaKnown RBP16.57■□□□□ 0.24
VEGFA-221ENST00000520265 TRPV1Q8NER1 839 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 MAP4K1Q92918 833 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 TINF2Q9BSI4 451 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 RANBP17Q9H2T7 1088 aaKnown RBP16.57■□□□□ 0.24
VEGFA-221ENST00000520265 VAT1LQ9HCJ6 419 aa16.57■□□□□ 0.24
VEGFA-221ENST00000520265 PDE4DIPQ5VU43 2346 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 ZNF536O15090 1300 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 PTPDC1A2A3K4 754 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 ICAM1P05362 532 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 ASPRV1Q53RT3 343 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 MUM1L1Q5H9M0 696 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 ANKLE1Q8NAG6 615 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 LSG1Q9H089 658 aaKnown RBP16.56■□□□□ 0.24
VEGFA-221ENST00000520265 C11orf49Q9H6J7 331 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 OGDHLQ9ULD0 1010 aa16.56■□□□□ 0.24
VEGFA-221ENST00000520265 PFASO15067 1338 aa16.55■□□□□ 0.24
VEGFA-221ENST00000520265 EVI5O60447 810 aa16.55■□□□□ 0.24
VEGFA-221ENST00000520265 CAPN2P17655 700 aa16.55■□□□□ 0.24
VEGFA-221ENST00000520265 RNF20Q5VTR2 975 aa16.55■□□□□ 0.24
VEGFA-221ENST00000520265 BTNL9Q6UXG8 535 aa16.55■□□□□ 0.24
VEGFA-221ENST00000520265 NFXL1Q6ZNB6 911 aa16.55■□□□□ 0.24
VEGFA-221ENST00000520265 STOX1Q6ZVD7 989 aa16.55■□□□□ 0.24
VEGFA-221ENST00000520265 A1CFQ9NQ94 594 aaKnown RBP16.55■□□□□ 0.24
VEGFA-221ENST00000520265 PPP4R2Q9NY27 417 aa16.55■□□□□ 0.24
VEGFA-221ENST00000520265 DIS3Q9Y2L1 958 aaKnown RBP16.55■□□□□ 0.24
VEGFA-221ENST00000520265 SLC27A2O14975 620 aa16.54■□□□□ 0.24
VEGFA-221ENST00000520265 SEPT4O43236 478 aa16.54■□□□□ 0.24
VEGFA-221ENST00000520265 SNHG28P0DPA3 235 aa16.54■□□□□ 0.24
VEGFA-221ENST00000520265 CALML3P27482 149 aa16.54■□□□□ 0.24
VEGFA-221ENST00000520265 CNTN2Q02246 1040 aa16.54■□□□□ 0.24
VEGFA-221ENST00000520265 CDC37Q16543 378 aaPredicted RBP16.54■□□□□ 0.24
VEGFA-221ENST00000520265 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
VEGFA-221ENST00000520265 LHX8Q68G74 356 aa16.54■□□□□ 0.24
VEGFA-221ENST00000520265 NUP133Q8WUM0 1156 aa16.54■□□□□ 0.24
VEGFA-221ENST00000520265 KBTBD13C9JR72 458 aa16.53■□□□□ 0.24
VEGFA-221ENST00000520265 PRC1O43663 620 aa16.53■□□□□ 0.24
VEGFA-221ENST00000520265 RARBP10826 455 aa16.53■□□□□ 0.24
VEGFA-221ENST00000520265 GJC2Q5T442 439 aaPredicted RBP16.53■□□□□ 0.24
VEGFA-221ENST00000520265 NOL8Q76FK4 1167 aaKnown RBP16.53■□□□□ 0.24
VEGFA-221ENST00000520265 CATIPQ7Z7H3 387 aa16.53■□□□□ 0.24
VEGFA-221ENST00000520265 ADGRF4Q8IZF3 695 aa16.53■□□□□ 0.24
VEGFA-221ENST00000520265 ANKS1AQ92625 1134 aa16.53■□□□□ 0.24
VEGFA-221ENST00000520265 NR2E3Q9Y5X4 410 aa16.53■□□□□ 0.24
VEGFA-221ENST00000520265 FRMPD3Q5JV73 1810 aa16.53■□□□□ 0.24
VEGFA-221ENST00000520265 SYNGAP1Q96PV0 1343 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 DNAJC25-GNG10A0A024R161 153 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 NFIBO00712 420 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 AKR1A1P14550 325 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 SEC23AQ15436 765 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 ARMCX2Q7L311 632 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 HOMER1Q86YM7 354 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 C7orf61Q8IZ16 206 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 ARRDC4Q8NCT1 418 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 LENG1Q96BZ8 264 aaPredicted RBP16.52■□□□□ 0.24
VEGFA-221ENST00000520265 SENP6Q9GZR1 1112 aaPredicted RBP16.52■□□□□ 0.24
VEGFA-221ENST00000520265 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.52■□□□□ 0.24
VEGFA-221ENST00000520265 PNMA2Q9UL42 364 aa16.52■□□□□ 0.24
VEGFA-221ENST00000520265 CCDC69A6NI79 296 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 KLRF2D3W0D1 207 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 MCM5P33992 734 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 BAATQ14032 418 aaPredicted RBP16.51■□□□□ 0.23
VEGFA-221ENST00000520265 RNF207Q6ZRF8 634 aa16.51■□□□□ 0.23
VEGFA-221ENST00000520265 EEPD1Q7L9B9 569 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms