RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	DTWD2	Q8NBA8	298 aa		10.03	□□□□□ -0.8
SDCBP-208	ENST00000520228	PIWIL2	Q8TC59	973 aa	Known RBP	10.03	□□□□□ -0.8
SDCBP-208	ENST00000520228	MICAL1	Q8TDZ2	1067 aa		10.03	□□□□□ -0.8
SDCBP-208	ENST00000520228	PCDHB10	Q9UN67	800 aa		10.03	□□□□□ -0.8
SDCBP-208	ENST00000520228	PRDM15	P57071	1507 aa	Predicted RBP	10.02	□□□□□ -0.8
SDCBP-208	ENST00000520228	NUP155	O75694	1391 aa		10.02	□□□□□ -0.8
SDCBP-208	ENST00000520228	ARHGAP31	Q2M1Z3	1444 aa		10.02	□□□□□ -0.81
SDCBP-208	ENST00000520228	GNAT3	A8MTJ3	354 aa		10.02	□□□□□ -0.81
SDCBP-208	ENST00000520228	NBPF9	Q3BBW0	867 aa		10.02	□□□□□ -0.81
SDCBP-208	ENST00000520228	BBS9	Q3SYG4	887 aa		10.02	□□□□□ -0.81
SDCBP-208	ENST00000520228	SMARCC1	Q92922	1105 aa	Predicted RBP	10.02	□□□□□ -0.81
SDCBP-208	ENST00000520228	ST14	Q9Y5Y6	855 aa		10.02	□□□□□ -0.81
SDCBP-208	ENST00000520228	MROH1	Q8NDA8	1641 aa		10.02	□□□□□ -0.81
SDCBP-208	ENST00000520228	SHOX	O15266	292 aa		10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	SERINC3	Q13530	473 aa		10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	FXN	Q16595	210 aa		10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	ANKRD39	Q53RE8	183 aa		10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	TDRD10	Q5VZ19	366 aa	Known RBP	10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	VHLL	Q6RSH7	139 aa		10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	PLD6	Q8N2A8	252 aa	Known RBP	10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	NETO1	Q8TDF5	533 aa		10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	DNAJC2	Q99543	621 aa	Known RBP	10.01	□□□□□ -0.81
SDCBP-208	ENST00000520228	NAIP	Q13075	1403 aa		10	□□□□□ -0.81
SDCBP-208	ENST00000520228	ERVK-7	P63135	1459 aa		10	□□□□□ -0.81
SDCBP-208	ENST00000520228	MED26	O95402	600 aa		10	□□□□□ -0.81
SDCBP-208	ENST00000520228	SRF	P11831	508 aa		10	□□□□□ -0.81
SDCBP-208	ENST00000520228	CHMP4BP1	P59074	171 aa		10	□□□□□ -0.81
SDCBP-208	ENST00000520228	SLC7A5	Q01650	507 aa		10	□□□□□ -0.81
SDCBP-208	ENST00000520228	GNPTAB	Q3T906	1256 aa		10	□□□□□ -0.81
SDCBP-208	ENST00000520228	SOGA3	Q5TF21	947 aa		10	□□□□□ -0.81
SDCBP-208	ENST00000520228	LARP1B	Q659C4	914 aa	Known RBP	10	□□□□□ -0.81
SDCBP-208	ENST00000520228	INTS5	Q6P9B9	1019 aa	Known RBP	10	□□□□□ -0.81
SDCBP-208	ENST00000520228	LMTK2	Q8IWU2	1503 aa		10	□□□□□ -0.81
SDCBP-208	ENST00000520228	A2ML1	A8K2U0	1454 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	NLRP1	Q9C000	1473 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	COBL	O75128	1261 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	ITIH2	P19823	946 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	AUH	Q13825	339 aa	Known RBP	9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	IFI16	Q16666	785 aa	Known RBP	9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	DDR2	Q16832	855 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	C6orf15	Q6UXA7	325 aa	Predicted RBP	9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	FAM178B	Q8IXR5	827 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	GPR62	Q9BZJ7	368 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	KCNH3	Q9ULD8	1083 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	R3HCC1	Q9Y3T6	440 aa	Known RBP	9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	SNX11	Q9Y5W9	270 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	PREX1	Q8TCU6	1659 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	HFM1	A2PYH4	1435 aa		9.99	□□□□□ -0.81
SDCBP-208	ENST00000520228	VWDE	Q8N2E2	1590 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	CBFA2T2	O43439	604 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	CD97	P48960	835 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	CLCN7	P51798	805 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	NCAPH	Q15003	741 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	ARHGAP27	Q6ZUM4	889 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	ANKLE2	Q86XL3	938 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	CCDC144CP	Q8IYA2	1237 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	C7orf61	Q8IZ16	206 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	MKRN2	Q9H000	416 aa	Known RBP	9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	DUSP15	Q9H1R2	295 aa	Predicted RBP	9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	USP35	Q9P2H5	1018 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	SUSD2	Q9UGT4	822 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	MSRB2	Q9Y3D2	182 aa		9.98	□□□□□ -0.81
SDCBP-208	ENST00000520228	SETD1B	Q9UPS6	1966 aa	Known RBP	9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	DEPDC5	O75140	1603 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	ZC3H13	Q5T200	1668 aa	Known RBP	9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	FAM155A	B1AL88	458 aa	Predicted RBP	9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228		B2RBV5	119 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	TP53	P04637	393 aa	Predicted RBP	9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	GRIK1	P39086	918 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	SNW1	Q13573	536 aa	Known RBP	9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	IDI1	Q13907	227 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	DCAF15	Q66K64	600 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	MRM1	Q6IN84	353 aa	Known RBP	9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	KIAA1211L	Q6NV74	962 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	TRIM55	Q9BYV6	548 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	PRDM14	Q9GZV8	571 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	SEMA3G	Q9NS98	782 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	SLC52A1	Q9NWF4	448 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	SPATA31D1	Q6ZQQ2	1576 aa		9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	9.97	□□□□□ -0.81
SDCBP-208	ENST00000520228	TMEM265	A0A087WTH1	108 aa		9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	IGSF3	O75054	1194 aa		9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	GJB6	O95452	261 aa		9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	SPINK2	P20155	84 aa		9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	HSPA12B	Q96MM6	686 aa		9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	HAUS7	Q99871	368 aa		9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	ST7	Q9NRC1	585 aa		9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	FAM86C1	Q9NVL1	165 aa		9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	SIRPG	Q9P1W8	387 aa		9.96	□□□□□ -0.82
SDCBP-208	ENST00000520228	SHISA3	A0PJX4	238 aa		9.95	□□□□□ -0.82
SDCBP-208	ENST00000520228	DTX1	Q86Y01	620 aa		9.95	□□□□□ -0.82
SDCBP-208	ENST00000520228	PMFBP1	Q8TBY8	1022 aa		9.95	□□□□□ -0.82
SDCBP-208	ENST00000520228	KLHL25	Q9H0H3	589 aa		9.95	□□□□□ -0.82
SDCBP-208	ENST00000520228	PRR13	Q9NZ81	148 aa		9.95	□□□□□ -0.82
SDCBP-208	ENST00000520228	ZNF451	Q9Y4E5	1061 aa		9.95	□□□□□ -0.82
SDCBP-208	ENST00000520228	NOS1	P29475	1434 aa		9.95	□□□□□ -0.82
SDCBP-208	ENST00000520228	PLA2R1	Q13018	1463 aa		9.95	□□□□□ -0.82

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