RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 RANBP17Q9H2T7 1088 aaKnown RBP19.6■□□□□ 0.73
TSNARE1-205ENST00000520166 PPP1R9AQ9ULJ8 1098 aa19.6■□□□□ 0.73
TSNARE1-205ENST00000520166 NAPAP54920 295 aa19.59■□□□□ 0.73
TSNARE1-205ENST00000520166 TRIM29Q14134 588 aa19.59■□□□□ 0.73
TSNARE1-205ENST00000520166 FAM160B2Q86V87 743 aa19.59■□□□□ 0.73
TSNARE1-205ENST00000520166 ZNF157P51786 506 aaPredicted RBP19.59■□□□□ 0.73
TSNARE1-205ENST00000520166 CPXCR1Q8N123 301 aa19.59■□□□□ 0.73
TSNARE1-205ENST00000520166 P2RX7Q99572 595 aaKnown RBP19.59■□□□□ 0.73
TSNARE1-205ENST00000520166 FTOQ9C0B1 505 aaKnown RBP eCLIP19.59■□□□□ 0.73
TSNARE1-205ENST00000520166 RAVER2Q9HCJ3 691 aaKnown RBP19.59■□□□□ 0.73
TSNARE1-205ENST00000520166 PCDHA1Q9Y5I3 950 aa19.59■□□□□ 0.73
TSNARE1-205ENST00000520166 SMCO2A6NFE2 343 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L15C9J2P7 530 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L13C9JLJ4 530 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L11C9JVI0 530 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L18D6R9N7 530 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L22D6RA61 530 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L17D6RBQ6 530 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L19D6RCP7 530 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L20D6RJB6 530 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 DSG3P32926 999 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 DNM1Q05193 864 aaKnown RBP19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L24Q0WX57 530 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 FBXO11Q86XK2 927 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 RASAL3Q86YV0 1011 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 BRI3BPQ8WY22 251 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 TBC1D5Q92609 795 aa19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 RBM27Q9P2N5 1060 aaKnown RBP19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 TFIP11Q9UBB9 837 aaKnown RBP19.58■□□□□ 0.72
TSNARE1-205ENST00000520166 UNCXA6NJT0 531 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 VWA5AO00534 786 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 OPLAHO14841 1288 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 SNAPC2Q13487 334 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 COG2Q14746 738 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 TNFRSF25Q93038 417 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 ZIC5Q96T25 663 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 PTPN18Q99952 460 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 SLC38A10Q9HBR0 1119 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 GDPD2Q9HCC8 539 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 TMEM260Q9NX78 707 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 TLL2Q9Y6L7 1015 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 PARP14Q460N5 1801 aa19.57■□□□□ 0.72
TSNARE1-205ENST00000520166 SPDYE16A6NNV3 312 aaPredicted RBP19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 BAG4O95429 457 aaKnown RBP19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 UBE2SQ16763 222 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 PROCA1Q8NCQ7 364 aaPredicted RBP19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 REPS2Q8NFH8 660 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 R3HDMLQ9H3Y0 253 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 SH3GLB2Q9NR46 395 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 ABT1Q9ULW3 272 aaKnown RBP19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 LOC285556D6RIA3 1793 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 M0R2N6 131 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 WNT7AO00755 349 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 U2AF2P26368 475 aaKnown RBP eCLIP19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 NBR1Q14596 966 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 RGMBQ6NW40 437 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 PGBD1Q96JS3 809 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 AMNQ9BXJ7 453 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 ZMYND12Q9H0C1 365 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 ASCC2Q9H1I8 757 aaPredicted RBP19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 BIN2Q9UBW5 565 aaPredicted RBP19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 ADAMTS5Q9UNA0 930 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 AGTPBP1Q9UPW5 1226 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 CNPY2Q9Y2B0 182 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 RIPK3Q9Y572 518 aa19.56■□□□□ 0.72
TSNARE1-205ENST00000520166 CCL15-CCL14A0A0B4J2E2 113 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 BTBD19C9JJ37 291 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 CYP2C8P10632 490 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 XBP1P17861 261 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 HOXA7P31268 230 aaPredicted RBP19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 KRT2P35908 639 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 TMEM132BQ14DG7 1078 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 CCL15Q16663 113 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 BLIDQ8IZY5 108 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 PCDHA6Q9UN73 950 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 PCDHA4Q9UN74 947 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 PCDHA8Q9Y5H6 950 aa19.55■□□□□ 0.72
TSNARE1-205ENST00000520166 TMEM88BA6NKF7 163 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 GRM1Q13255 1194 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 USP17L6PQ6QN14 398 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 FAM43AQ8N2R8 423 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 HOMER2Q9NSB8 354 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 BTBD7Q9P203 1132 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 FAM155AB1AL88 458 aaPredicted RBP19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 TOB1P50616 345 aaPredicted RBP19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 GTF2A2P52657 109 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 MUM1L1Q5H9M0 696 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 JAKMIP3Q5VZ66 844 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 FASTKD5Q7L8L6 764 aaKnown RBP19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 NOSTRINQ8IVI9 506 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 CCPG1Q9ULG6 757 aa19.54■□□□□ 0.72
TSNARE1-205ENST00000520166 COL11A1P12107 1806 aaPredicted RBP19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 TCHHQ07283 1943 aa19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 ICAM1P05362 532 aa19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 ATP2B1P20020 1258 aa19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 HTRA3P83110 453 aa19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 GNL2Q13823 731 aaKnown RBP19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 SAFBQ15424 915 aaKnown RBP eCLIP19.53■□□□□ 0.72
TSNARE1-205ENST00000520166 PIK3AP1Q6ZUJ8 805 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms