RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 NCAPG2Q86XI2 1143 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 CLEC10AQ8IUN9 316 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 IFNL3Q8IZI9 196 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 GMCL1P1Q8NEA9 526 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 NEDD1Q8NHV4 660 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 PI4K2BQ8TCG2 481 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 GPATCH3Q96I76 525 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 MMP19Q99542 508 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 TINF2Q9BSI4 451 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 TSEN34Q9BSV6 310 aaKnown RBP6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 MKNK2Q9HBH9 465 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 SLC38A10Q9HBR0 1119 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 EPB41L4AQ9HCS5 686 aaPredicted RBP6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 FBXO28Q9NVF7 368 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 MTMR4Q9NYA4 1195 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 PHF24Q9UPV7 400 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 STXBP5LQ9Y2K9 1186 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 LTBP2Q14767 1821 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 SYNGAP1Q96PV0 1343 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 SALL3Q9BXA9 1300 aa6.75□□□□□ -1.33
CTNNA1-219ENST00000520158 LAMA3Q16787 3333 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 KBTBD13C9JR72 458 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 ERC2O15083 957 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 GPAA1O43292 621 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 ADAMTS4O75173 837 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 SNAI1O95863 264 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 NDUFB10O96000 172 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 FGRP09769 529 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 PLS1Q14651 629 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 KCTD2Q14681 263 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 ZMYM1Q5SVZ6 1142 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 PRAMEF19Q5SWL8 479 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 FAM83BQ5T0W9 1011 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 GJC2Q5T442 439 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 CCSAPQ6IQ19 270 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 ANKRD33Q7Z3H0 272 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 ZNF444Q8N0Y2 327 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 DEFB123Q8N688 67 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 KLHDC9Q8NEP7 349 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 CHST13Q8NET6 341 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 TOX2Q96NM4 488 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 LBHD1Q9BQE6 289 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 SLF1Q9BQI6 1058 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 TEX13BQ9BXU2 312 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 CLIP2Q9UDT6 1046 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 FEM1BQ9UK73 627 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 RIPK3Q9Y572 518 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 PCDHB15Q9Y5E8 787 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 MYH4Q9Y623 1939 aa6.74□□□□□ -1.33
CTNNA1-219ENST00000520158 MOXD2PA6NHM9 499 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 MINDY4BA8MYZ0 360 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 KIAA0355O15063 1070 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 ZBED4O75132 1171 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 DUSP11O75319 330 aaKnown RBP6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 TTLL1O95922 423 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 PGK2P07205 417 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 RARBP10826 455 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 AKR1A1P14550 325 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 CST5P28325 142 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 ADCYAP1R1P41586 468 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 MDM2Q00987 491 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 ALX1Q15699 326 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 FAM47AQ5JRC9 791 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 PPP4R3BQ5MIZ7 849 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 FAM43BQ6ZT52 329 aaPredicted RBP6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 RNF180Q86T96 592 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 SLC17A8Q8NDX2 589 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 CEP95Q96GE4 821 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 GMCL1Q96IK5 515 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 NACAP1Q9BZK3 213 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 XPNPEP3Q9NQH7 507 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 PDLIM7Q9NR12 457 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 PRKAG2Q9UGJ0 569 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 FBXO40Q9UH90 709 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 ANAPC4Q9UJX5 808 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 FAM184BQ9ULE4 1060 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 TACC3Q9Y6A5 838 aa6.73□□□□□ -1.33
CTNNA1-219ENST00000520158 TRIM43BA6NCK2 446 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 M0R2C6 588 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 FOXP2O15409 715 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 MAFGO15525 162 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 SLC3A2P08195 630 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 BMP3P12645 472 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 TAL1P17542 331 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 CDK7P50613 346 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 ACLYP53396 1101 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 SMAD3P84022 425 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 TLE2Q04725 743 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 PDE4BQ07343 736 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 TKFCQ3LXA3 575 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 TRIM60Q495X7 471 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 SNRNP48Q6IEG0 339 aaKnown RBP6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 RCSD1Q6JBY9 416 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 FAM160B2Q86V87 743 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 CHURC1Q8WUH1 139 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 STAG1Q8WVM7 1258 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 TRIM43Q96BQ3 446 aaPredicted RBP6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 DDX11Q96FC9 970 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 FGD4Q96M96 766 aa6.72□□□□□ -1.33
CTNNA1-219ENST00000520158 NUP88Q99567 741 aaPredicted RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms