RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 PRR12Q9ULL5 1215 aa17.61■□□□□ 0.41
FBXO28-204ENST00000519894 PFASO15067 1338 aa17.61■□□□□ 0.41
FBXO28-204ENST00000519894 DNAJC25-GNG10A0A024R161 153 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 COL6A1P12109 1028 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 SNAP25P60880 206 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 TTBK2Q6IQ55 1244 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 CHST13Q8NET6 341 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 ESR2Q92731 530 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 AGBL1Q96MI9 1066 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 ZKSCAN3Q9BRR0 538 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 TINF2Q9BSI4 451 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 CTNNA3Q9UI47 895 aa17.6■□□□□ 0.41
FBXO28-204ENST00000519894 RAD50Q92878 1312 aa17.59■□□□□ 0.41
FBXO28-204ENST00000519894 B4E1Z4 1266 aa17.59■□□□□ 0.41
FBXO28-204ENST00000519894 SEPT4O43236 478 aa17.59■□□□□ 0.41
FBXO28-204ENST00000519894 EVI5O60447 810 aa17.59■□□□□ 0.41
FBXO28-204ENST00000519894 IMMTQ16891 758 aaKnown RBP17.59■□□□□ 0.41
FBXO28-204ENST00000519894 CCDC96Q2M329 555 aa17.59■□□□□ 0.41
FBXO28-204ENST00000519894 ANO1Q5XXA6 986 aa17.59■□□□□ 0.41
FBXO28-204ENST00000519894 BTNL9Q6UXG8 535 aa17.59■□□□□ 0.41
FBXO28-204ENST00000519894 FBXO40Q9UH90 709 aa17.59■□□□□ 0.41
FBXO28-204ENST00000519894 NR2E3Q9Y5X4 410 aa17.59■□□□□ 0.41
FBXO28-204ENST00000519894 FRMPD2Q68DX3 1309 aaPredicted RBP17.58■□□□□ 0.4
FBXO28-204ENST00000519894 GALR2O43603 387 aaPredicted RBP17.58■□□□□ 0.4
FBXO28-204ENST00000519894 KDM4AO75164 1064 aa17.58■□□□□ 0.4
FBXO28-204ENST00000519894 PDHBP11177 359 aa17.58■□□□□ 0.4
FBXO28-204ENST00000519894 TAL1P17542 331 aaPredicted RBP17.58■□□□□ 0.4
FBXO28-204ENST00000519894 SLC16A2P36021 539 aa17.58■□□□□ 0.4
FBXO28-204ENST00000519894 NT5C2P49902 561 aa17.58■□□□□ 0.4
FBXO28-204ENST00000519894 CCDC174Q6PII3 467 aa17.58■□□□□ 0.4
FBXO28-204ENST00000519894 DGKHQ86XP1 1220 aa17.58■□□□□ 0.4
FBXO28-204ENST00000519894 RUFY2Q8WXA3 655 aa17.58■□□□□ 0.4
FBXO28-204ENST00000519894 HOMER2Q9NSB8 354 aa17.58■□□□□ 0.4
FBXO28-204ENST00000519894 NRBP1Q9UHY1 535 aa17.58■□□□□ 0.4
FBXO28-204ENST00000519894 COLQQ9Y215 455 aaPredicted RBP17.58■□□□□ 0.4
FBXO28-204ENST00000519894 ZNF865P0CJ78 1059 aaPredicted RBP17.57■□□□□ 0.4
FBXO28-204ENST00000519894 SNHG28P0DPA3 235 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 PTH1RQ03431 593 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 TKFCQ3LXA3 575 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 HABP4Q5JVS0 413 aaKnown RBP17.57■□□□□ 0.4
FBXO28-204ENST00000519894 MAMDC4Q6UXC1 1216 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 ANKRD35Q8N283 1001 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 MSL3Q8N5Y2 521 aaKnown RBP17.57■□□□□ 0.4
FBXO28-204ENST00000519894 FGD4Q96M96 766 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 RANBP17Q9H2T7 1088 aaKnown RBP17.57■□□□□ 0.4
FBXO28-204ENST00000519894 ACAD9Q9H845 621 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 GPCPD1Q9NPB8 672 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 RNF146Q9NTX7 359 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 ZSWIM5Q9P217 1185 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 SMCHD1A6NHR9 2005 aa17.57■□□□□ 0.4
FBXO28-204ENST00000519894 SNAI1O95863 264 aaPredicted RBP17.56■□□□□ 0.4
FBXO28-204ENST00000519894 ALAS1P13196 640 aa17.56■□□□□ 0.4
FBXO28-204ENST00000519894 ZNF543Q08ER8 600 aa17.56■□□□□ 0.4
FBXO28-204ENST00000519894 SYDE2Q5VT97 1194 aa17.56■□□□□ 0.4
FBXO28-204ENST00000519894 ZNF467Q7Z7K2 595 aaPredicted RBP17.56■□□□□ 0.4
FBXO28-204ENST00000519894 IQCA1Q86XH1 822 aa17.56■□□□□ 0.4
FBXO28-204ENST00000519894 ANKS1AQ92625 1134 aa17.56■□□□□ 0.4
FBXO28-204ENST00000519894 TRERF1Q96PN7 1200 aa17.56■□□□□ 0.4
FBXO28-204ENST00000519894 DNM1LO00429 736 aa17.55■□□□□ 0.4
FBXO28-204ENST00000519894 SGSM2O43147 1006 aa17.55■□□□□ 0.4
FBXO28-204ENST00000519894 CCDC178Q5BJE1 867 aa17.55■□□□□ 0.4
FBXO28-204ENST00000519894 MUM1L1Q5H9M0 696 aa17.55■□□□□ 0.4
FBXO28-204ENST00000519894 GJC2Q5T442 439 aaPredicted RBP17.55■□□□□ 0.4
FBXO28-204ENST00000519894 C7orf61Q8IZ16 206 aa17.55■□□□□ 0.4
FBXO28-204ENST00000519894 ZSCAN10Q96SZ4 725 aaPredicted RBP17.55■□□□□ 0.4
FBXO28-204ENST00000519894 KRT23Q9C075 422 aa17.55■□□□□ 0.4
FBXO28-204ENST00000519894 SENP6Q9GZR1 1112 aaPredicted RBP17.55■□□□□ 0.4
FBXO28-204ENST00000519894 A1CFQ9NQ94 594 aaKnown RBP17.55■□□□□ 0.4
FBXO28-204ENST00000519894 SYNGAP1Q96PV0 1343 aa17.54■□□□□ 0.4
FBXO28-204ENST00000519894 ICAM1P05362 532 aa17.54■□□□□ 0.4
FBXO28-204ENST00000519894 CNTN2Q02246 1040 aa17.54■□□□□ 0.4
FBXO28-204ENST00000519894 LRRC26Q2I0M4 334 aa17.54■□□□□ 0.4
FBXO28-204ENST00000519894 FAM133AQ8N9E0 248 aa17.54■□□□□ 0.4
FBXO28-204ENST00000519894 ARRDC4Q8NCT1 418 aa17.54■□□□□ 0.4
FBXO28-204ENST00000519894 CNNM2Q9H8M5 875 aa17.54■□□□□ 0.4
FBXO28-204ENST00000519894 CCPG1Q9ULG6 757 aa17.54■□□□□ 0.4
FBXO28-204ENST00000519894 CNPY2Q9Y2B0 182 aa17.54■□□□□ 0.4
FBXO28-204ENST00000519894 POTEB2H3BUK9 544 aa17.53■□□□□ 0.4
FBXO28-204ENST00000519894 CYP21A2P08686 494 aa17.53■□□□□ 0.4
FBXO28-204ENST00000519894 LRRC41Q15345 812 aa17.53■□□□□ 0.4
FBXO28-204ENST00000519894 SKAP1Q86WV1 359 aa17.53■□□□□ 0.4
FBXO28-204ENST00000519894 ENAHQ8N8S7 591 aaPredicted RBP17.53■□□□□ 0.4
FBXO28-204ENST00000519894 PNMA1Q8ND90 353 aa17.53■□□□□ 0.4
FBXO28-204ENST00000519894 PRO3102Q9H379 93 aa17.53■□□□□ 0.4
FBXO28-204ENST00000519894 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.53■□□□□ 0.4
FBXO28-204ENST00000519894 TNKSO95271 1327 aa17.52■□□□□ 0.4
FBXO28-204ENST00000519894 SOWAHBA6NEL2 793 aa17.52■□□□□ 0.4
FBXO28-204ENST00000519894 SLC34A2O95436 690 aa17.52■□□□□ 0.4
FBXO28-204ENST00000519894 GOLGA8HP0CJ92 632 aa17.52■□□□□ 0.4
FBXO28-204ENST00000519894 RARBP10826 455 aa17.52■□□□□ 0.4
FBXO28-204ENST00000519894 AKR1A1P14550 325 aa17.52■□□□□ 0.4
FBXO28-204ENST00000519894 CYB5R4Q7L1T6 521 aa17.52■□□□□ 0.4
FBXO28-204ENST00000519894 CENPQQ7L2Z9 268 aaPredicted RBP17.52■□□□□ 0.4
FBXO28-204ENST00000519894 KAT14Q9H8E8 782 aa17.52■□□□□ 0.4
FBXO28-204ENST00000519894 RBM27Q9P2N5 1060 aaKnown RBP17.52■□□□□ 0.4
FBXO28-204ENST00000519894 ZMYND8Q9ULU4 1186 aaPredicted RBP17.52■□□□□ 0.4
FBXO28-204ENST00000519894 ACVR2BQ13705 512 aa17.51■□□□□ 0.39
FBXO28-204ENST00000519894 SEC23AQ15436 765 aa17.51■□□□□ 0.39
FBXO28-204ENST00000519894 GPATCH4Q5T3I0 446 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms