RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 EHD4Q9H223 541 aa6.5□□□□□ -1.37
CTNNA1-218ENST00000519768 SUV39H2Q9H5I1 410 aa6.5□□□□□ -1.37
CTNNA1-218ENST00000519768 LIN7BQ9HAP6 207 aa6.5□□□□□ -1.37
CTNNA1-218ENST00000519768 FZD1Q9UP38 647 aa6.5□□□□□ -1.37
CTNNA1-218ENST00000519768 PSMD14O00487 310 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 GIPC1O14908 333 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 FKTNO75072 461 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 GADD45BO75293 160 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 PRPF40AO75400 957 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 HOXA10P31260 410 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 TM4SF4P48230 202 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 ADAMTSL4Q6UY14 1074 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 TPTE2Q6XPS3 522 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 Q7L0L9 218 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 MAP4K3Q8IVH8 894 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 DMRTC2Q8IXT2 367 aaPredicted RBP6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 RGS22Q8NE09 1264 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 FRMD6Q96NE9 622 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 LACRTQ9GZZ8 138 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 SRA1Q9HD15 236 aaKnown RBP6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 SOX13Q9UN79 622 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 PPME1Q9Y570 386 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 TRIM17Q9Y577 477 aa6.49□□□□□ -1.37
CTNNA1-218ENST00000519768 A0A0A0MRY4 1105 aa6.48□□□□□ -1.37
CTNNA1-218ENST00000519768 TRIM28Q13263 835 aaKnown RBP6.48□□□□□ -1.37
CTNNA1-218ENST00000519768 GRM2Q14416 872 aa6.48□□□□□ -1.37
CTNNA1-218ENST00000519768 PRRT3Q5FWE3 981 aa6.48□□□□□ -1.37
CTNNA1-218ENST00000519768 SUSD4Q5VX71 490 aa6.48□□□□□ -1.37
CTNNA1-218ENST00000519768 ZNF790Q6PG37 636 aa6.48□□□□□ -1.37
CTNNA1-218ENST00000519768 ZNF428Q96B54 188 aa6.48□□□□□ -1.37
CTNNA1-218ENST00000519768 SRCIN1Q9C0H9 1055 aa6.48□□□□□ -1.37
CTNNA1-218ENST00000519768 PPP4R2Q9NY27 417 aa6.48□□□□□ -1.37
CTNNA1-218ENST00000519768 COL4A1P02462 1669 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 A0A096LPE4 126 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 A0A1W2PPZ6 126 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 COL8A1P27658 744 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 RAC1P63000 192 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 PTPN12Q05209 780 aaKnown RBP6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 CLEC4GQ6UXB4 293 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 PI16Q6UXB8 463 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 NGEFQ8N5V2 710 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 GLIS3Q8NEA6 775 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 CD99L2Q8TCZ2 262 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 ASAP3Q8TDY4 903 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 WNT8BQ93098 351 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 RTFDC1Q9BY42 306 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 BCO2Q9BYV7 579 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 SH2B1Q9NRF2 756 aaPredicted RBP6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 GGA3Q9NZ52 723 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 PTPN22Q9Y2R2 807 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 UBN2Q6ZU65 1347 aa6.47□□□□□ -1.37
CTNNA1-218ENST00000519768 RBBP6Q7Z6E9 1792 aaKnown RBP6.46□□□□□ -1.37
CTNNA1-218ENST00000519768 RTL9Q8NET4 1388 aa6.46□□□□□ -1.37
CTNNA1-218ENST00000519768 SCN9AQ15858 1988 aa6.46□□□□□ -1.37
CTNNA1-218ENST00000519768 TMEM238LA0A1B0GVL6 79 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 H3BRJ5 948 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 H7C1D1 291 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 SPATA31C1P0DKV0 1188 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 XRCC5P13010 732 aaKnown RBP6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 EPHA1P21709 976 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 ITPKAP23677 461 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 GPTP24298 496 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 GNA15P30679 374 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 GRIA4P48058 902 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 KIAA2012Q0VF49 1180 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 FAM117BQ6P1L5 589 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 TTLL7Q6ZT98 887 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 VN1R5Q7Z5H4 357 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 FBXO11Q86XK2 927 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 FMR1NBQ8N0W7 255 aaPredicted RBP6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 ARMC5Q96C12 935 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 CRAMP1Q96RY5 1269 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 DBNDD1Q9H9R9 158 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 ZFYVE1Q9HBF4 777 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 ABCB6Q9NP58 842 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 ATP6V0A2Q9Y487 856 aa6.46□□□□□ -1.38
CTNNA1-218ENST00000519768 METTL12A8MUP2 240 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 LINC01387J3KSC0 135 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 IGF2BP3O00425 579 aaKnown RBP eCLIP6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 ELNP15502 786 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 PRKG1Q13976 671 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 SETDB1Q15047 1291 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 ANGEL2Q5VTE6 544 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 NXPE4Q6UWF7 544 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 TTC5Q8N0Z6 440 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 DCPSQ96C86 337 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 SHISA4Q96DD7 197 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 ZNF333Q96JL9 665 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 DUSP9Q99956 384 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 ABCC4O15439 1325 aa6.45□□□□□ -1.38
CTNNA1-218ENST00000519768 DUOX1Q9NRD9 1551 aa6.44□□□□□ -1.38
CTNNA1-218ENST00000519768 ZSWIM8A7E2V4 1837 aa6.44□□□□□ -1.38
CTNNA1-218ENST00000519768 NUP98P52948 1817 aa6.44□□□□□ -1.38
CTNNA1-218ENST00000519768 EIF4EBP3O60516 100 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-218ENST00000519768 DEAF1O75398 565 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-218ENST00000519768 TNIP1Q15025 636 aa6.44□□□□□ -1.38
CTNNA1-218ENST00000519768 SPRED3Q2MJR0 410 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms