RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 TRPV6Q9H1D0 765 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 LAS1LQ9Y4W2 734 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 DOCK2Q92608 1830 aa8.63□□□□□ -1.03
CTNNA1-216ENST00000519489 ROBO3Q96MS0 1386 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 TNKSO95271 1327 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 MBTPS2O43462 519 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 FRAT2O75474 233 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 ASGR1P07306 291 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 SIGLEC14Q08ET2 396 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 PICALMQ13492 652 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 TCEAL5Q5H9L2 206 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 CRIPAKQ8N1N5 446 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 KCNV2Q8TDN2 545 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 PABPC5Q96DU9 382 aaKnown RBP8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 NPDC1Q9NQX5 325 aaPredicted RBP8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 TMOD4Q9NZQ9 345 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 TIMELESSQ9UNS1 1208 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 IVNS1ABPQ9Y6Y0 642 aa8.62□□□□□ -1.03
CTNNA1-216ENST00000519489 MROH7Q68CQ1 1323 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 A0A0U1RQG5 324 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 C3orf80F5H4A9 247 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 ELL2O00472 640 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 PPP4CP60510 307 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 ERVK-21P61565 698 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 CCNA1P78396 465 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 RSPO4Q2I0M5 234 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 LMBR1LQ6UX01 489 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 DEFB128Q7Z7B8 93 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 DCLK2Q8N568 766 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 GTF3C2Q8WUA4 911 aaPredicted RBP8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 TBC1D2Q9BYX2 928 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 DNAJC18Q9H819 358 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 CNNM1Q9NRU3 951 aa8.61□□□□□ -1.03
CTNNA1-216ENST00000519489 LINC01553A4QN01 128 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 LOC730098B7Z3J9 87 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 STXBP3O00186 592 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 B4GALT4O60513 344 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 ERCC3P19447 782 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 RHBDL3P58872 404 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 COL9A3Q14050 684 aaPredicted RBP8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 TCTN1Q2MV58 587 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 LBX2Q6XYB7 198 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 CATSPERGQ6ZRH7 1159 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 NUDT18Q6ZVK8 323 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 G2E3Q7L622 706 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 VGLL2Q8N8G2 317 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 PHOSPHO2Q8TCD6 241 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 GLT1D1Q96MS3 346 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 SLC9A7Q96T83 725 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 PCDHGC5Q9Y5F6 944 aa8.6□□□□□ -1.03
CTNNA1-216ENST00000519489 C19orf81C9J6K1 198 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 USP17L10C9JJH3 530 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 PGK2P07205 417 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 PTGS1P23219 599 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 CST5P28325 142 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 TMPOP42166 694 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 ATXN1P54253 815 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 CBX2Q14781 532 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 CTC1Q2NKJ3 1217 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 PADI6Q6TGC4 694 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 EP400NLQ6ZTU2 488 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 VPS37DQ86XT2 251 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 RPUSD2Q8IZ73 545 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 C17orf80Q9BSJ5 609 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 AS3MTQ9HBK9 375 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 NRBP1Q9UHY1 535 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 CHMP3Q9Y3E7 222 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 CEP295Q9C0D2 2601 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 ZNF236Q9UL36 1845 aa8.59□□□□□ -1.03
CTNNA1-216ENST00000519489 HELZ2Q9BYK8 2649 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 TLR3O15455 904 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 TBX10O75333 385 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 AKR1A1P14550 325 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 DEFB103AP81534 67 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 ZYXQ15942 572 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 LRRC24Q50LG9 513 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 RPAINQ86UA6 219 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 LURAP1LQ8IV03 231 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 ZNF384Q8TF68 577 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 VTI1AQ96AJ9 217 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 MRPL38Q96DV4 380 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 TINF2Q9BSI4 451 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 MBIPQ9NS73 344 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 CLDND1Q9NY35 253 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 MYO7AQ13402 2215 aa8.58□□□□□ -1.04
CTNNA1-216ENST00000519489 SOBPA7XYQ1 873 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L15C9J2P7 530 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L13C9JLJ4 530 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L11C9JVI0 530 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L18D6R9N7 530 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L22D6RA61 530 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L17D6RBQ6 530 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L19D6RCP7 530 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 USP17L20D6RJB6 530 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 STRNO43815 780 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 GDF11O95390 407 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 SNAI1O95863 264 aaPredicted RBP8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 ADRB1P08588 477 aa8.57□□□□□ -1.04
CTNNA1-216ENST00000519489 CYP2C9P11712 490 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms