RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	NAALADL2	Q58DX5	795 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	PPP4R3B	Q5MIZ7	849 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	CC2D2B	Q6DHV5	1058 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	NEK8	Q86SG6	692 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	REXO1	Q8N1G1	1221 aa	Known RBP	14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	STAM	Q92783	540 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	DDTL	A6NHG4	134 aa	Predicted RBP	14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	SLURP2	P0DP57	97 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	SFPQ	P23246	707 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	KCNJ6	P48051	423 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	CACNB3	P54284	484 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	KARS	Q15046	597 aa	Known RBP	14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	AOC3	Q16853	763 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	GPATCH4	Q5T3I0	446 aa	Known RBP	14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	SPATA1	Q5VX52	437 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	SH3BP5L	Q7L8J4	393 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	AK8	Q96MA6	479 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	JMJD4	Q9H9V9	463 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	STK32B	Q9NY57	414 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	ZNF219	Q9P2Y4	722 aa	Predicted RBP	14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	PI4KB	Q9UBF8	816 aa		14.01	□□□□□ -0.17
SPIDR-210	ENST00000519362	TMEM232	C9JQI7	657 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	CCNT1	O60563	726 aa	Known RBP	14	□□□□□ -0.17
SPIDR-210	ENST00000519362	OR52Z1	P0C646	297 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	EN1	Q05925	392 aa	Predicted RBP	14	□□□□□ -0.17
SPIDR-210	ENST00000519362	LETM2	Q2VYF4	491 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	PPP1R18	Q6NYC8	613 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	TATDN1	Q6P1N9	297 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	APTX	Q7Z2E3	356 aa	Known RBP	14	□□□□□ -0.17
SPIDR-210	ENST00000519362	ADGRF4	Q8IZF3	695 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	TBCK	Q8TEA7	893 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	MKL1	Q969V6	931 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	MTMR8	Q96EF0	704 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	BLZF1	Q9H2G9	400 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	GPCPD1	Q9NPB8	672 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	SAMSN1	Q9NSI8	373 aa	Known RBP	14	□□□□□ -0.17
SPIDR-210	ENST00000519362	SYNRG	Q9UMZ2	1314 aa		14	□□□□□ -0.17
SPIDR-210	ENST00000519362	PNMA6F	A0A0J9YX94	578 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	USP27X	A6NNY8	438 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	PP2D1	A8MPX8	630 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	MPHOSPH10	O00566	681 aa	Known RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	UBA7	P41226	1012 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	STAT6	P42226	847 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	TCP10	Q12799	353 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	TPD52L1	Q16890	204 aa	Predicted RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	HSP90AA4P	Q58FG1	418 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	CDKAL1	Q5VV42	579 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	CCAR2	Q8N163	923 aa	Known RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	SUPT20H	Q8NEM7	779 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	COA7	Q96BR5	231 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	C16orf45	Q96MC5	204 aa	Predicted RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	BIN2	Q9UBW5	565 aa	Predicted RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	MYH4	Q9Y623	1939 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	DYNC1I1	O14576	645 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	EDIL3	O43854	480 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	PPP1R11	O60927	126 aa	Predicted RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	RPN1	P04843	607 aa	Known RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	MYL1	P05976	194 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	CDK11B	P21127	795 aa	Known RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	RBM5	P52756	815 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	TBX2	Q13207	712 aa	Predicted RBP	13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	NR1I3	Q14994	352 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	JAKMIP3	Q5VZ66	844 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	RRAGB	Q5VZM2	374 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	TTBK2	Q6IQ55	1244 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	NYAP1	Q6ZVC0	841 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	TMX1	Q9H3N1	280 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	KBTBD4	Q9NVX7	518 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	RMND1	Q9NWS8	449 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	TMEM260	Q9NX78	707 aa		13.99	□□□□□ -0.17
SPIDR-210	ENST00000519362	ATRNL1	Q5VV63	1379 aa		13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362		A0A1B0GTH6	734 aa		13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362	YDJC	A8MPS7	323 aa		13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362	CLK2	P49760	499 aa	Known RBP	13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362	ADCY7	P51828	1080 aa		13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362	CERKL	Q49MI3	558 aa	Predicted RBP	13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362	ZNF658	Q5TYW1	1059 aa	Predicted RBP	13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362	KANSL2	Q9H9L4	492 aa		13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362	RIC8A	Q9NPQ8	531 aa		13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362	NYAP2	Q9P242	653 aa		13.98	□□□□□ -0.17
SPIDR-210	ENST00000519362	COL2A1	P02458	1487 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	ZBTB5	O15062	677 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	EEF2	P13639	858 aa	Known RBP	13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	TNNT1	P13805	278 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	SEMA3F	Q13275	785 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	E4F1	Q66K89	784 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	KLHL10	Q6JEL2	608 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	SIAH1	Q8IUQ4	282 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	IGSF22	Q8N9C0	903 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	CCDC112	Q8NEF3	446 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	LRRC15	Q8TF66	581 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	MTMR9	Q96QG7	549 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	CUEDC2	Q9H467	287 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	MAGEF1	Q9HAY2	307 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	PSD	A5PKW4	1024 aa	Predicted RBP	13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	FAM196B	A6NMK8	535 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	USP17L10	C9JJH3	530 aa		13.97	□□□□□ -0.17
SPIDR-210	ENST00000519362	ENTPD3	O75355	529 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms