RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 KRTAP4-9Q9BYQ8 210 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 ZNF112Q9UJU3 913 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 TTF2Q9UNY4 1162 aaKnown RBP7.65□□□□□ -1.18
PABPC1-207ENST00000518716 RIPOR2Q9Y4F9 1068 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 NR2E3Q9Y5X4 410 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 CSADQ9Y600 493 aa7.65□□□□□ -1.18
PABPC1-207ENST00000518716 DOCK3Q8IZD9 2030 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 MYBBP1AQ9BQG0 1328 aaKnown RBP7.64□□□□□ -1.19
PABPC1-207ENST00000518716 TCP10L2B9ZVM9 353 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 APAF1O14727 1248 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 CAPN2P17655 700 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 CRKP46108 304 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 PPATQ06203 517 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 KIF22Q14807 665 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 EPHA10Q5JZY3 1008 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 APOBEC3HQ6NTF7 200 aaKnown RBP7.64□□□□□ -1.19
PABPC1-207ENST00000518716 FAM83AQ86UY5 434 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 LINS1Q8NG48 757 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 GDF15Q99988 308 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 GOPCQ9HD26 462 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 CPA4Q9UI42 421 aa7.64□□□□□ -1.19
PABPC1-207ENST00000518716 ALPK3Q96L96 1907 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 FARP2O94887 1054 aaPredicted RBP7.63□□□□□ -1.19
PABPC1-207ENST00000518716 HOXD10P28358 340 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 RBM5P52756 815 aaKnown RBP eCLIP7.63□□□□□ -1.192e-12■■■■□ 23.8
PABPC1-207ENST00000518716 PRKCZQ05513 592 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 CALD1Q05682 793 aaKnown RBP7.63□□□□□ -1.19
PABPC1-207ENST00000518716 IFIT5Q13325 482 aaKnown RBP7.63□□□□□ -1.19
PABPC1-207ENST00000518716 UBE4AQ14139 1066 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 FBXO33Q7Z6M2 555 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 ZDHHC15Q96MV8 337 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 WRNIP1Q96S55 665 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 RNF208Q9H0X6 261 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 PAK6Q9NQU5 681 aaPredicted RBP7.63□□□□□ -1.19
PABPC1-207ENST00000518716 STAP2Q9UGK3 403 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 GABRQQ9UN88 632 aa7.63□□□□□ -1.19
PABPC1-207ENST00000518716 RPAP1Q9BWH6 1393 aaPredicted RBP7.62□□□□□ -1.19
PABPC1-207ENST00000518716 MYPNQ86TC9 1320 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 PDHXO00330 501 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 WDHD1O75717 1129 aaPredicted RBP7.62□□□□□ -1.19
PABPC1-207ENST00000518716 HIBADHP31937 336 aaKnown RBP7.62□□□□□ -1.19
PABPC1-207ENST00000518716 INPP5BP32019 993 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 TXLNAP40222 546 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 GYG1P46976 350 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 TNNI2P48788 182 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 CACNB3P54284 484 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 SFSWAPQ12872 951 aaKnown RBP7.62□□□□□ -1.19
PABPC1-207ENST00000518716 FLIIQ13045 1269 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 IRF5Q13568 498 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 LRIT3Q3SXY7 679 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 OXLD1Q5BKU9 147 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 RAET1EQ8TD07 263 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 DNAAF4Q8WXU2 420 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 ZNF594Q96JF6 807 aaPredicted RBP7.62□□□□□ -1.19
PABPC1-207ENST00000518716 MYH16Q9H6N6 1097 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 MTMR10Q9NXD2 777 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 STXBP5LQ9Y2K9 1186 aa7.62□□□□□ -1.19
PABPC1-207ENST00000518716 CDK2AP1O14519 115 aa7.61□□□□□ -1.19
PABPC1-207ENST00000518716 CXCL11O14625 94 aa7.61□□□□□ -1.19
PABPC1-207ENST00000518716 UBXN2AP68543 259 aa7.61□□□□□ -1.19
PABPC1-207ENST00000518716 WDR43Q15061 677 aaKnown RBP eCLIP7.61□□□□□ -1.19
PABPC1-207ENST00000518716 NOL9Q5SY16 702 aaKnown RBP7.61□□□□□ -1.19
PABPC1-207ENST00000518716 BEND3Q5T5X7 828 aa7.61□□□□□ -1.19
PABPC1-207ENST00000518716 LMBR1LQ6UX01 489 aa7.61□□□□□ -1.19
PABPC1-207ENST00000518716 LDHAL6AQ6ZMR3 332 aa7.61□□□□□ -1.19
PABPC1-207ENST00000518716 RAB44Q7Z6P3 723 aaPredicted RBP7.61□□□□□ -1.19
PABPC1-207ENST00000518716 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.61□□□□□ -1.19
PABPC1-207ENST00000518716 TSR2Q969E8 191 aaKnown RBP7.61□□□□□ -1.19
PABPC1-207ENST00000518716 KAZALD1Q96I82 304 aa7.61□□□□□ -1.19
PABPC1-207ENST00000518716 PUS3Q9BZE2 481 aaKnown RBP7.61□□□□□ -1.19
PABPC1-207ENST00000518716 SERTAD1Q9UHV2 236 aa7.61□□□□□ -1.19
PABPC1-207ENST00000518716 CACNA1FO60840 1977 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 MUC3AQ02505 3323 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 ATRNL1Q5VV63 1379 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 MGAMO43451 1857 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 ADCY3O60266 1144 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 LILRB5O75023 590 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 CYP2C8P10632 490 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 FLT3LGP49771 235 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 FCGRTP55899 365 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 TWISTNBQ3B726 338 aaPredicted RBP7.6□□□□□ -1.19
PABPC1-207ENST00000518716 HHIPL2Q6UWX4 724 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 LRRC69Q6ZNQ3 347 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 Q7L0L9 218 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 DEFB123Q8N688 67 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 VGLL2Q8N8G2 317 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 TEKT1Q969V4 418 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 HOOK2Q96ED9 719 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 STK31Q9BXU1 1019 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 ZNF341Q9BYN7 854 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 PCMTD2Q9NV79 361 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 SLC45A1Q9Y2W3 748 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 SUGT1Q9Y2Z0 365 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 NCOR1O75376 2440 aa7.6□□□□□ -1.19
PABPC1-207ENST00000518716 A6NJY4 79 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 TMEM229AB2RXF0 380 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 PLIN1O60240 522 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 VAMP4O75379 141 aa7.59□□□□□ -1.19
PABPC1-207ENST00000518716 PDIA4P13667 645 aaKnown RBP7.59□□□□□ -1.19
PABPC1-207ENST00000518716 CDK11BP21127 795 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms