RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 PAK6Q9NQU5 681 aaPredicted RBP11.59□□□□□ -0.55
TTC1-202ENST00000518560 ZNF236Q9UL36 1845 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 M0R2C6 588 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 TFRCP02786 760 aaKnown RBP11.58□□□□□ -0.56
TTC1-202ENST00000518560 USP14P54578 494 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 MSS51Q4VC12 460 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 TMEM179Q6ZVK1 233 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 KBTBD3Q8NAB2 608 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 DPF3Q92784 378 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 NUDT12Q9BQG2 462 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 TANGO6Q9C0B7 1094 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 ATP8A2Q9NTI2 1148 aa11.58□□□□□ -0.56
TTC1-202ENST00000518560 PLXNA1Q9UIW2 1896 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 CEP290O15078 2479 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 GSG1L2A8MUP6 293 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 MAPK4P31152 587 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 ATP2B2Q01814 1243 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 ICA1Q05084 483 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 HABP4Q5JVS0 413 aaKnown RBP11.57□□□□□ -0.56
TTC1-202ENST00000518560 ZSCAN25Q6NSZ9 544 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 C16orf86Q6ZW13 317 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 PLEKHH3Q7Z736 793 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 CCAR1Q8IX12 1150 aaKnown RBP11.57□□□□□ -0.56
TTC1-202ENST00000518560 PI4K2BQ8TCG2 481 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 USP6NLQ92738 828 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 MRGPRX2Q96LB1 330 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 STRBPQ96SI9 672 aaKnown RBP11.57□□□□□ -0.56
TTC1-202ENST00000518560 SEC62Q99442 399 aaKnown RBP11.57□□□□□ -0.56
TTC1-202ENST00000518560 REPIN1Q9BWE0 567 aaKnown RBP11.57□□□□□ -0.56
TTC1-202ENST00000518560 CWC22Q9HCG8 908 aaKnown RBP11.57□□□□□ -0.56
TTC1-202ENST00000518560 FLRT1Q9NZU1 646 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 SWAP70Q9UH65 585 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 RABGAP1Q9Y3P9 1069 aa11.57□□□□□ -0.56
TTC1-202ENST00000518560 J3QL48 77 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 GPAA1O43292 621 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 ZKSCAN1P17029 563 aaPredicted RBP11.56□□□□□ -0.56
TTC1-202ENST00000518560 CCND3P30281 292 aaPredicted RBP11.56□□□□□ -0.56
TTC1-202ENST00000518560 GCGRP47871 477 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 NPLOC4Q8TAT6 608 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 GTF3C2Q8WUA4 911 aaPredicted RBP11.56□□□□□ -0.56
TTC1-202ENST00000518560 SOCS4Q8WXH5 440 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 APPBP2Q92624 585 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 ATG4CQ96DT6 458 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 GPATCH3Q96I76 525 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 PAWRQ96IZ0 340 aaKnown RBP11.56□□□□□ -0.56
TTC1-202ENST00000518560 APBA2Q99767 749 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 HMX1Q9NP08 348 aaPredicted RBP11.56□□□□□ -0.56
TTC1-202ENST00000518560 RPTORQ8N122 1335 aa11.56□□□□□ -0.56
TTC1-202ENST00000518560 MINDY4BA8MYZ0 360 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 RNF113AO15541 343 aaKnown RBP11.55□□□□□ -0.56
TTC1-202ENST00000518560 RAD21O60216 631 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 EEF2P13639 858 aaKnown RBP11.55□□□□□ -0.56
TTC1-202ENST00000518560 RASA1P20936 1047 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 RGS2P41220 211 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 CACNB2Q08289 660 aaPredicted RBP11.55□□□□□ -0.56
TTC1-202ENST00000518560 MAP2K5Q13163 448 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 MAP3K21Q5TCX8 1036 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 LBX2Q6XYB7 198 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 AMOTL1Q8IY63 956 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 DDRGK1Q96HY6 314 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.55□□□□□ -0.56
TTC1-202ENST00000518560 MOV10L1Q9BXT6 1211 aaKnown RBP11.55□□□□□ -0.56
TTC1-202ENST00000518560 ARHGEF10LQ9HCE6 1279 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 FBXO28Q9NVF7 368 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 ARPP21Q9UBL0 812 aaPredicted RBP11.55□□□□□ -0.56
TTC1-202ENST00000518560 TMX2Q9Y320 296 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 SALL3Q9BXA9 1300 aa11.55□□□□□ -0.56
TTC1-202ENST00000518560 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 PRDM1O75626 825 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 FLOT1O75955 427 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 LCE2CQ5TA81 110 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 CCDC129Q6ZRS4 1044 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 GCC1Q96CN9 775 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 NUP88Q99567 741 aaPredicted RBP11.54□□□□□ -0.56
TTC1-202ENST00000518560 FSD1Q9BTV5 496 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 HTATIP2Q9BUP3 242 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 VCPKMTQ9H867 229 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 TTC41PQ6P2S7 1318 aa11.54□□□□□ -0.56
TTC1-202ENST00000518560 XRCC5P13010 732 aaKnown RBP11.53□□□□□ -0.56
TTC1-202ENST00000518560 MX1P20591 662 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 TDO2P48775 406 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 CCNA1P78396 465 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 GRB14Q14449 540 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 PLS1Q14651 629 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 COG2Q14746 738 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 FAM83BQ5T0W9 1011 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 HPS1Q92902 700 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 CCDC17Q96LX7 622 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 TRIOBPQ9H2D6 2365 aa11.53□□□□□ -0.56
TTC1-202ENST00000518560 SLC15A5A6NIM6 579 aa11.52□□□□□ -0.57
TTC1-202ENST00000518560 WDR46O15213 610 aaKnown RBP11.52□□□□□ -0.57
TTC1-202ENST00000518560 FOXP2O15409 715 aa11.52□□□□□ -0.57
TTC1-202ENST00000518560 GLRX3O76003 335 aaKnown RBP11.52□□□□□ -0.57
TTC1-202ENST00000518560 APPP05067 770 aa11.52□□□□□ -0.57
TTC1-202ENST00000518560 ERCC3P19447 782 aa11.52□□□□□ -0.57
TTC1-202ENST00000518560 ADORA2AP29274 412 aa11.52□□□□□ -0.57
TTC1-202ENST00000518560 CYP2C19P33261 490 aa11.52□□□□□ -0.57
TTC1-202ENST00000518560 FXR1P51114 621 aaKnown RBP eCLIP11.52□□□□□ -0.57
TTC1-202ENST00000518560 SBK1Q52WX2 424 aa11.52□□□□□ -0.57
TTC1-202ENST00000518560 ANKRD45Q5TZF3 282 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms