RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 ZNF587Q96SQ5 575 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-204ENST00000517862 RUBCNLQ9H714 662 aa4.64□□□□□ -1.67
CPNE3-204ENST00000517862 CYLDQ9NQC7 956 aa4.64□□□□□ -1.67
CPNE3-204ENST00000517862 PAK6Q9NQU5 681 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-204ENST00000517862 EGFL7Q9UHF1 273 aa4.64□□□□□ -1.67
CPNE3-204ENST00000517862 NARFQ9UHQ1 456 aa4.64□□□□□ -1.67
CPNE3-204ENST00000517862 ASTN2O75129 1339 aaPredicted RBP4.64□□□□□ -1.67
CPNE3-204ENST00000517862 CGNL1Q0VF96 1302 aa4.64□□□□□ -1.67
CPNE3-204ENST00000517862 FLT4P35916 1363 aa4.64□□□□□ -1.67
CPNE3-204ENST00000517862 UBR5O95071 2799 aaPredicted RBP4.63□□□□□ -1.67
CPNE3-204ENST00000517862 ZBTB48P10074 688 aaPredicted RBP4.63□□□□□ -1.67
CPNE3-204ENST00000517862 NPR1P16066 1061 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 ARHGAP4P98171 946 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 ZNF124Q15973 351 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 LRRC26Q2I0M4 334 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 RNF20Q5VTR2 975 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 PRAMEF18Q5VWM3 479 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 MCTP2Q6DN12 878 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 FIGNL1Q6PIW4 674 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 BMP8AQ7Z5Y6 402 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 FBXO33Q7Z6M2 555 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 RAPGEF4Q8WZA2 1011 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 PTPN18Q99952 460 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 C14orf93Q9H972 538 aaKnown RBP4.63□□□□□ -1.67
CPNE3-204ENST00000517862 CHD7Q9P2D1 2997 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 PFASO15067 1338 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 MYPNQ86TC9 1320 aa4.63□□□□□ -1.67
CPNE3-204ENST00000517862 COL4A4P53420 1690 aaPredicted RBP4.63□□□□□ -1.67
CPNE3-204ENST00000517862 DSPP15924 2871 aaKnown RBP4.63□□□□□ -1.67
CPNE3-204ENST00000517862 FBN2P35556 2912 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 A0A1W2PRU2 124 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 CYP27B1O15528 508 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 ARHGAP6O43182 974 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 RECKO95980 971 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 NTRK1P04629 796 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 INHAP05111 366 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 NF2P35240 595 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 GRIK1P39086 918 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 PSMC4P43686 418 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 SCTRP47872 440 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 PCBP4P57723 403 aaKnown RBP4.62□□□□□ -1.67
CPNE3-204ENST00000517862 ST5P78524 1137 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 AOC3Q16853 763 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 KIF4BQ2VIQ3 1234 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 RGL3Q3MIN7 710 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 ANGEL2Q5VTE6 544 aaKnown RBP4.62□□□□□ -1.67
CPNE3-204ENST00000517862 ARMC9Q7Z3E5 817 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 CNBD1Q8NA66 436 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 WNK4Q96J92 1243 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 LSM14BQ9BX40 385 aaKnown RBP4.62□□□□□ -1.67
CPNE3-204ENST00000517862 DCTN4Q9UJW0 460 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 FRYLO94915 3013 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 ADGRA2Q96PE1 1338 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 SNED1Q8TER0 1413 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 NOTCH2Q04721 2471 aa4.62□□□□□ -1.67
CPNE3-204ENST00000517862 SMG1Q96Q15 3661 aaKnown RBP4.61□□□□□ -1.67
CPNE3-204ENST00000517862 LOC400499M0QZD8 3231 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 EIF4E1BA6NMX2 242 aaKnown RBP4.61□□□□□ -1.67
CPNE3-204ENST00000517862 ESPNB1AK53 854 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 ADAMTS4O75173 837 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 PROS1P07225 676 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 TATP17735 454 aaPredicted RBP4.61□□□□□ -1.67
CPNE3-204ENST00000517862 WEE1P30291 646 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 RAC1P63000 192 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 TSNAXIP1Q2TAA8 658 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 ZNF648Q5T619 568 aaPredicted RBP4.61□□□□□ -1.67
CPNE3-204ENST00000517862 SHISA2Q6UWI4 295 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 CCDC129Q6ZRS4 1044 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 DPF2Q92785 391 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 ASB16Q96NS5 453 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 ZNF358Q9NW07 568 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 PRR12Q9ULL5 1215 aa4.61□□□□□ -1.67
CPNE3-204ENST00000517862 IGSF10Q6WRI0 2623 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 CEP295Q9C0D2 2601 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 CREBBPQ92793 2442 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 TMEM221A6NGB7 291 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 M0R296 226 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 ADCY3O60266 1144 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 WDHD1O75717 1129 aaPredicted RBP4.6□□□□□ -1.67
CPNE3-204ENST00000517862 TGFB1P01137 390 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 P4HBP07237 508 aaKnown RBP4.6□□□□□ -1.67
CPNE3-204ENST00000517862 SPINK2P20155 84 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 CTGFP29279 349 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 ALDH1B1P30837 517 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 CCR10P46092 362 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 VCPP55072 806 aaKnown RBP4.6□□□□□ -1.67
CPNE3-204ENST00000517862 USP4Q13107 963 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 NBPF9Q3BBW0 867 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 LDLRAD1Q5T700 205 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 ZNF468Q5VIY5 522 aaPredicted RBP4.6□□□□□ -1.67
CPNE3-204ENST00000517862 TBC1D9BQ66K14 1250 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 CC2D2BQ6DHV5 1058 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 INTS5Q6P9B9 1019 aaKnown RBP4.6□□□□□ -1.67
CPNE3-204ENST00000517862 FBXL6Q8N531 539 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 BADQ92934 168 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.6□□□□□ -1.67
CPNE3-204ENST00000517862 SCAF8Q9UPN6 1271 aaKnown RBP4.6□□□□□ -1.67
CPNE3-204ENST00000517862 POLQO75417 2590 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 WASHC2AQ641Q2 1341 aa4.6□□□□□ -1.67
CPNE3-204ENST00000517862 TMEM229AB2RXF0 380 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms