RNA–Protein interactions for RNA: ENST00000517766.5

CD47-205, Transcript of CD47 molecule, humanhuman

TSL 2

Gene CD47, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-205ENST00000517766 POU4F2Q12837 409 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
CD47-205ENST00000517766 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 SPTY2D1Q68D10 685 aaPredicted RBP6.86□□□□□ -1.31
CD47-205ENST00000517766 PRR5LQ6MZQ0 368 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 SMIM5Q71RC9 77 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 TMC4Q7Z404 712 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 ATCAYQ86WG3 371 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 AMIGO3Q86WK7 504 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 MB21D2Q8IYB1 491 aaPredicted RBP6.86□□□□□ -1.31
CD47-205ENST00000517766 IFNL3Q8IZI9 196 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 FAM184AQ8NB25 1140 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 RPGRQ92834 1020 aaKnown RBP6.86□□□□□ -1.31
CD47-205ENST00000517766 KLRG1Q96E93 195 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 FAM84BQ96KN1 310 aaPredicted RBP6.86□□□□□ -1.31
CD47-205ENST00000517766 TCEANC2Q96MN5 208 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 MTA3Q9BTC8 594 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 NIFKQ9BYG3 293 aaKnown RBP6.86□□□□□ -1.31
CD47-205ENST00000517766 PHACTR1Q9C0D0 580 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 NAPBQ9H115 298 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 CNNM2Q9H8M5 875 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.86□□□□□ -1.31
CD47-205ENST00000517766 RAI14Q9P0K7 980 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 MTMR6Q9Y217 621 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 MYH6P13533 1939 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 MYH2Q9UKX2 1941 aa6.86□□□□□ -1.31
CD47-205ENST00000517766 DLEC1Q9Y238 1755 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 XDHP47989 1333 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 FIGNL2A6NMB9 653 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 SNAP23O00161 211 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 SPINT1O43278 529 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 PRC1O43663 620 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 DHX16O60231 1041 aaKnown RBP6.85□□□□□ -1.31
CD47-205ENST00000517766 BBOX1O75936 387 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 RHOQP17081 205 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 CYP7A1P22680 504 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 RXRBP28702 533 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 HAND2P61296 217 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 SCRN1Q12765 414 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 STK3Q13188 491 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 DGKZQ13574 1117 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 GNASQ5JWF2 1037 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 TTLL5Q6EMB2 1281 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 C15orf52Q6ZUT6 534 aaKnown RBP6.85□□□□□ -1.31
CD47-205ENST00000517766 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 SMARCC2Q8TAQ2 1214 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 RHBDD1Q8TEB9 315 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 SYAP1Q96A49 352 aaPredicted RBP6.85□□□□□ -1.31
CD47-205ENST00000517766 TMEM87BQ96K49 555 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 KRT23Q9C075 422 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 RNF41Q9H4P4 317 aaPredicted RBP6.85□□□□□ -1.31
CD47-205ENST00000517766 ABCF2Q9UG63 623 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 SLC4A4Q9Y6R1 1079 aa6.85□□□□□ -1.31
CD47-205ENST00000517766 SALL1Q9NSC2 1324 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 VPS37CA5D8V6 355 aaPredicted RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 GSG1L2A8MUP6 293 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 FAM13AO94988 1023 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 PCP11498 1178 aaKnown RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 PDIA3P30101 505 aaKnown RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 HOXA10P31260 410 aaPredicted RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 EIF1AXP47813 144 aaKnown RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 TDO2P48775 406 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 NT5C2P49902 561 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 MRE11P49959 708 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 RNF144AP50876 292 aaPredicted RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 KRT85P78386 507 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 APOBRQ0VD83 1088 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 CRY2Q49AN0 593 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 AKNAD1Q5T1N1 836 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 NAA16Q6N069 864 aaPredicted RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 GIMAP6Q6P9H5 292 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 LYPD4Q6UWN0 246 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 MFSD6Q6ZSS7 791 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 NLGN1Q8N2Q7 840 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 NSUN7Q8NE18 718 aaKnown RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 WDR66Q8TBY9 1149 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 CRAMP1Q96RY5 1269 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 LRRC2Q9BYS8 371 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 ZSCAN16Q9H4T2 348 aaPredicted RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 ARMT1Q9H993 441 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 TFCP2L1Q9NZI6 479 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 STIM2Q9P246 746 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 ANKIB1Q9P2G1 1089 aa6.84□□□□□ -1.31
CD47-205ENST00000517766 COL1A1P02452 1464 aaPredicted RBP6.84□□□□□ -1.31
CD47-205ENST00000517766 NAV1Q8NEY1 1877 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 CDK5RAP2Q96SN8 1893 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 ECM29Q5VYK3 1845 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 IRS2Q9Y4H2 1338 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 A0A0G2JLW4 131 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 FSD2A1L4K1 749 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 KLRG2A4D1S0 409 aaPredicted RBP6.83□□□□□ -1.32
CD47-205ENST00000517766 H3BQV1 296 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 POLRMTO00411 1230 aaKnown RBP6.83□□□□□ -1.32
CD47-205ENST00000517766 MAN1A2O60476 641 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 CDKL5O76039 1030 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 APBA3O96018 575 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 LIFRP42702 1097 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 ZNF445P59923 1031 aa6.83□□□□□ -1.32
CD47-205ENST00000517766 UBE2HP62256 183 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms