RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 CCDC144BQ3MJ40 725 aa10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 ZSCAN25Q6NSZ9 544 aa10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 NOL8Q76FK4 1167 aaKnown RBP10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 C16orf59Q7L2K0 433 aa10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 MICALL1Q8N3F8 863 aa10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 PRPF38AQ8NAV1 312 aaKnown RBP10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 KIF1BPQ96EK5 621 aa10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 SEZ6LQ9BYH1 1024 aa10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 UPF3AQ9H1J1 476 aaKnown RBP10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 PAG1Q9NWQ8 432 aa10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 CXXC1Q9P0U4 656 aaPredicted RBP10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 ARPP21Q9UBL0 812 aaPredicted RBP10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 RAPGEFL1Q9UHV5 662 aa10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 SLC4A4Q9Y6R1 1079 aa10.87□□□□□ -0.67
LINCR-0001-201ENST00000517732 DNAJC25-GNG10A0A024R161 153 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 CYP2D7A0A087X1C5 515 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 ZEB2O60315 1214 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 ADGRE1Q14246 886 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 SKIV2LQ15477 1246 aaKnown RBP10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 PPP2R2DQ66LE6 453 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 ARMCX2Q7L311 632 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 RPUSD2Q8IZ73 545 aaKnown RBP10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 CHST13Q8NET6 341 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 BCL11AQ9H165 835 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 HIPK3Q9H422 1215 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 MKNK2Q9HBH9 465 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 LRRC37A2A6NM11 1700 aa10.86□□□□□ -0.67
LINCR-0001-201ENST00000517732 ZBBXA8MT70 800 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 ATP2A1O14983 1001 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 HMMRO75330 724 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 CD4P01730 458 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 OTOP2Q7RTS6 562 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 KIFC2Q96AC6 838 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 NUP88Q99567 741 aaPredicted RBP10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 AP5M1Q9H0R1 490 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 ZNF287Q9HBT7 754 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 NYAP2Q9P242 653 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 HCN4Q9Y3Q4 1203 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 RIPK3Q9Y572 518 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 SLC4A7Q9Y6M7 1214 aa10.85□□□□□ -0.67
LINCR-0001-201ENST00000517732 SCN5AQ14524 2016 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 PRRC2BQ5JSZ5 2229 aaKnown RBP10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 ASB14A6NK59 587 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 F5H6K3 240 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 NDUFB10O96000 172 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 PFKMP08237 780 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 FDX1P10109 184 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 OAZ1P54368 228 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 BEX3Q00994 111 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 TNFAIP2Q03169 654 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 KLRC3Q07444 240 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 UBE3CQ15386 1083 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 CTR9Q6PD62 1173 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 TLK2Q86UE8 772 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 CCDC144CPQ8IYA2 1237 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 BOLA2Q9H3K6 86 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 RAVER2Q9HCJ3 691 aaKnown RBP10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 FEM1BQ9UK73 627 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 ISY1Q9ULR0 285 aaKnown RBP10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 YBX2Q9Y2T7 364 aaKnown RBP10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 PCDHA11Q9Y5I1 949 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 ZBED9Q6R2W3 1325 aa10.84□□□□□ -0.67
LINCR-0001-201ENST00000517732 TANC1Q9C0D5 1861 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 CCER2I3L3R5 266 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 ADCY6O43306 1168 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 CCL23P55773 120 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 NKX3-2P78367 333 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 IRX5P78411 483 aaPredicted RBP10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 ITGA7Q13683 1181 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 FSCN1Q16658 493 aaKnown RBP10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 CXCL17Q6UXB2 119 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 ACAD9Q9H845 621 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 SLC38A10Q9HBR0 1119 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 HOMER2Q9NSB8 354 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 CLIP2Q9UDT6 1046 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 COG6Q9Y2V7 657 aa10.83□□□□□ -0.68
LINCR-0001-201ENST00000517732 SMIM22K7EJ46 135 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 ERC2O15083 957 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 RAB11FIP3O75154 756 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 RLBP1P12271 317 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 ACTN1P12814 892 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 ATP2A2P16615 1042 aaKnown RBP10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 RASA1P20936 1047 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 RABGGTBP53611 331 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 IKQ13123 557 aaPredicted RBP10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 ZNF444Q8N0Y2 327 aaPredicted RBP10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 STK11IPQ8N1F8 1099 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 SLC43A3Q8NBI5 491 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 HAUS7Q99871 368 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 NOC4LQ9BVI4 516 aaKnown RBP10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 SYNPO2Q9UMS6 1093 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 COG5Q9UP83 839 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 UMODL1Q5DID0 1318 aa10.82□□□□□ -0.68
LINCR-0001-201ENST00000517732 TRIP12Q14669 1992 aaPredicted RBP10.81□□□□□ -0.68
LINCR-0001-201ENST00000517732 MINDY4BA8MYZ0 360 aa10.81□□□□□ -0.68
LINCR-0001-201ENST00000517732 B4GALT4O60513 344 aa10.81□□□□□ -0.68
LINCR-0001-201ENST00000517732 SUPT20HL2P0C7V6 817 aa10.81□□□□□ -0.68
LINCR-0001-201ENST00000517732 MS4A1P11836 297 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms