RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 CCDC91Q7Z6B0 441 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 PSMB7Q99436 277 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 MED4Q9NPJ6 270 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 GOLGA6BA6NDN3 693 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 CCDC169A6NNP5 214 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 IRX3P78415 501 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 NSMFQ6X4W1 530 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 MICALCLQ6ZW33 695 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 KRT25Q7Z3Z0 450 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 ATG3Q9NT62 314 aa12.03□□□□□ -0.48
PCDHGA1-202ENST00000517417 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 TEX33O43247 280 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 MFAP3LO75121 409 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 IFNAR1P17181 557 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 COPB1P53618 953 aaKnown RBP12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 OR8K1Q8NGG5 319 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 LMBR1Q8WVP7 490 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 ATRIPQ8WXE1 791 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 INCENPQ9NQS7 918 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 ZSWIM5Q9P217 1185 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 PIK3C2AO00443 1686 aa12.02□□□□□ -0.48
PCDHGA1-202ENST00000517417 SMIM23A6NLE4 172 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 CETN3O15182 167 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 MYCLP12524 364 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 PTPREP23469 700 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 ANTXR2P58335 489 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 FMR1Q06787 632 aaKnown RBP eCLIP12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 CALCRLQ16602 461 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 FAM196AQ6ZSG2 479 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 GPKOWQ92917 476 aaPredicted RBP eCLIP12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 ARHGEF10LQ9HCE6 1279 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 SRPRBQ9Y5M8 271 aaKnown RBP12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 EPN1Q9Y6I3 576 aaPredicted RBP12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 SCARF1Q14162 830 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 INF2Q27J81 1249 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 CABP7Q86V35 215 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 EPSTI1Q96J88 318 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 PLEKHA4Q9H4M7 779 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 HPS5Q9UPZ3 1129 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 FRMD4BQ9Y2L6 1034 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 ADGRG1Q9Y653 693 aa12.02□□□□□ -0.49
PCDHGA1-202ENST00000517417 WDR17Q8IZU2 1322 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 ZEB2O60315 1214 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 CASP1P29466 404 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 MCAMP43121 646 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 BIRC3Q13489 604 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 GRIPAP1Q4V328 841 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 TC2NQ8N9U0 490 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 GSDMAQ96QA5 445 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 MRPL44Q9H9J2 332 aaKnown RBP12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 PIH1D3Q9NQM4 214 aaKnown RBP12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 C1orf167Q5SNV9 1468 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 NEDD4P46934 1319 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 HAUS3Q68CZ6 603 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 SND1Q7KZF4 910 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■■■ 27.3
PCDHGA1-202ENST00000517417 CCDC50Q8IVM0 306 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 TBC1D22AQ8WUA7 517 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 ARPP21Q9UBL0 812 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 UBN2Q6ZU65 1347 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 KLRF2D3W0D1 207 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 RNF40O75150 1001 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 TBC1D8O95759 1140 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 FLAD1Q8NFF5 587 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 SECISBP2LQ93073 1101 aaKnown RBP12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 PAIP2Q9BPZ3 127 aaKnown RBP12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 HINFPQ9BQA5 517 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 HAUS4Q9H6D7 363 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 SH2D4AQ9H788 454 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 WDR19Q8NEZ3 1342 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 PRKAB2O43741 272 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 GSTA5Q7RTV2 222 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 CCDC25Q86WR0 208 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 LRRC47Q8N1G4 583 aaKnown RBP12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 VTI1AQ96AJ9 217 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 FAM207AQ9NSI2 230 aaPredicted RBP12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 ATP6V0A2Q9Y487 856 aa12.01□□□□□ -0.49
PCDHGA1-202ENST00000517417 FRMPD2Q68DX3 1309 aaPredicted RBP12□□□□□ -0.49
PCDHGA1-202ENST00000517417 SNAP23O00161 211 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 ZMYND10O75800 440 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 EPB41P11171 864 aaKnown RBP12□□□□□ -0.49
PCDHGA1-202ENST00000517417 VAV2P52735 878 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 CCDC155Q8N6L0 562 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 GINS2Q9Y248 185 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 IKBKGQ9Y6K9 419 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 NF2P35240 595 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 IL6STP40189 918 aaPredicted RBP12□□□□□ -0.49
PCDHGA1-202ENST00000517417 PAGE5Q96GU1 130 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 TSGA10Q9BZW7 698 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 MYO1AQ9UBC5 1043 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 ARHGEF35A5YM69 484 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 CYP27B1O15528 508 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 LIFRP42702 1097 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 PTGDRQ13258 359 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 PIGBQ92521 554 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 AGXT2Q9BYV1 514 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 NLRC4Q9NPP4 1024 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 KCND1Q9NSA2 647 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 DNM3Q9UQ16 869 aa12□□□□□ -0.49
PCDHGA1-202ENST00000517417 TECP42680 631 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms